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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA003436
Pigment epithelial cells
Not detected
Photoreceptor cells
Not detected
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
High
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 140.0
Min nTPM: 18.6
Std nTPM: 27.0
Median nTPM: 0.0
163_1
78 years, male
140.0
319_1
81 years, male
136.7
506_1
65 years, male
129.9
351_1
91 years, male
127.1
295_1
61 years, female
124.1
177_1
74 years, male
123.3
376_1
75 years, female
121.0
377_1
82 years, female
120.3
452_1
88 years, female
118.3
503_1
68 years, male
116.4
320_1
89 years, female
113.5
292_1
71 years, male
113.0
356_1
87 years, female
111.3
353_1
82 years, female
111.0
264_1
73 years, female
109.3
406_1
79 years, male
106.1
425_1
59 years, female
103.4
318_1
68 years, male
102.4
394_1
75 years, female
98.9
189_1
76 years, male
98.3
350_1
84 years, female
97.3
293_1
68 years, female
97.0
480_1
63 years, male
94.2
243_1
75 years, male
92.2
386_1
76 years, male
91.0
517_1
88 years, male
89.3
4_1
88 years, female
89.1
384_1
83 years, male
87.0
286_1
68 years, female
86.5
254_1
77 years, female
85.9
349_1
83 years, male
85.6
405_1
91 years, male
85.1
354_1
81 years, female
83.8
526_1
61 years, male
83.7
518_1
75 years, female
83.6
335_1
73 years, female
83.1
314_1
67 years, male
82.9
251_1
78 years, male
78.1
291_1
76 years, male
77.3
229_1
69 years, female
75.4
173_1
67 years, male
75.3
375_1
74 years, female
75.0
352_1
62 years, male
74.6
404_1
82 years, female
74.5
317_1
60 years, male
73.9
321_1
62 years, female
73.7
17_1
71 years, male
73.6
2_1
77 years, female
73.5
265_1
87 years, male
73.3
322_1
76 years, male
73.3
348_1
84 years, male
73.2
18_1
88 years, male
72.9
389_1
86 years, female
72.7
288_1
66 years, female
72.4
396_1
62 years, male
72.4
172_1
72 years, female
71.8
355_1
70 years, female
68.9
218_1
71 years, female
68.8
501_1
88 years, male
68.1
347_1
72 years, male
67.8
115_1
83 years, male
66.7
6_1
73 years, female
66.2
237_1
82 years, male
65.8
99_1
64 years, male
65.4
246_1
77 years, male
64.9
468_1
89 years, male
64.7
447_1
81 years, male
64.1
379_1
60 years, male
62.7
499_1
55 years, female
62.5
324_1
76 years, male
62.1
316_1
62 years, male
61.2
145_1
84 years, male
60.6
109_1
81 years, female
60.3
35_1
74 years, female
59.6
137_1
83 years, male
59.6
9_1
66 years, female
58.6
120_1
70 years, female
58.4
153_1
70 years, female
57.5
42_1
85 years, male
56.3
41_1
94 years, female
53.3
126_1
63 years, male
52.6
311_1
78 years, male
51.4
315_1
62 years, female
51.3
313_1
79 years, female
50.2
217_1
76 years, male
49.8
142_1
61 years, female
49.3
414_1
84 years, female
48.9
466_1
57 years, female
48.5
266_1
85 years, male
45.6
81_1
67 years, male
44.2
32_1
67 years, male
42.8
117_1
61 years, male
42.3
415_1
77 years, female
40.8
119_1
70 years, female
39.8
139_1
64 years, female
38.6
307_1
66 years, female
37.9
162_1
79 years, female
36.9
413_1
59 years, female
36.9
89_1
63 years, male
36.7
149_1
88 years, male
36.4
43_1
64 years, female
33.1
308_1
70 years, female
24.4
491_1
89 years, female
22.6
495_1
57 years, female
18.7
490_1
67 years, female
18.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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