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CSNK1A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:48.6 nTPM
HPA:48.6 nTPM
GTEx:45.8 nTPM
FANTOM5:65.5 Scaled Tags Per Million
Pig:72.9 nTPM
Mouse:203.7 nTPM
Allen mouse:17.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB016680
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.6
Sample id Sample description nTPM
Hippocampus
nTPM: 46.2
2529 Female, age 94, left hemisphere 54.9
1855 Male, age 76, left hemisphere 46.6
1898 Male, age 80, left hemisphere 46.3
1911 Female, age 85, right hemisphere 43.9
2148 Female, age 91, left hemisphere 42.8
2621 Female, age 67, right hemisphere 42.6
Dentate gyrus
nTPM: 48.6
2010 Male, age 76, both hemispheres 53.9
2530 Female, age 94, left hemisphere 51.5
2528 Male, age 74, both hemispheres 47.5
2531 Female, age 67, both hemispheres 47.3
1927 Female, age 91, both hemispheres 46.8
2246 Female, age 85, both hemispheres 44.4
Entorhinal gyrus
nTPM: 40.9
2117 Female, age 91, right hemisphere 46.4
2764 Male, age 80, right hemisphere 45.1
1787 Male, age 76, left hemisphere 43.0
2686 Male, age 75, right hemisphere 41.9
1938 Female, age 85, left hemisphere 36.7
2613 Female, age 94, left hemisphere 32.0
Hippocampus, CA1
nTPM: 47.8
2749 Male, age 80, left hemisphere 52.0
1873 Female, age 85, both hemispheres 48.3
2045 Male, age 76, both hemispheres 46.8
2082 Female, age 91, right hemisphere 46.8
2527 Male, age 74, both hemispheres 45.2
Hippocampus, CA2
nTPM: 46.0
1963 Male, age 80, left hemisphere 53.7
2249 Male, age 74, both hemispheres 49.0
1892 Male, age 76, both hemispheres 48.1
1940 Female, age 85, left hemisphere 46.5
2113 Female, age 91, right hemisphere 42.4
2437 Female, age 94, left hemisphere 36.1
Hippocampus, CA3
nTPM: 47.1
1867 Male, age 76, both hemispheres 52.1
2861 Female, age 67, both hemispheres 47.7
2436 Male, age 74, both hemispheres 47.2
2137 Male, age 80, left hemisphere 47.1
2620 Female, age 94, left hemisphere 45.2
1891 Female, age 85, both hemispheres 43.1
Parahippocampal cortex
nTPM: 41.5
2018 Male, age 76, both hemispheres 48.6
1933 Female, age 85, both hemispheres 46.6
1990 Female, age 91, right hemisphere 43.2
2532 Female, age 72, left hemisphere 43.1
1850 Male, age 80, both hemispheres 41.2
2692 Male, age 74, both hemispheres 40.6
2245 Female, age 91, both hemispheres 40.1
2250 Female, age 67, right hemisphere 38.9
2693 Female, age 94, both hemispheres 38.7
2622 Female, age 67, right hemisphere 33.9
Perirhinal gyrus
nTPM: 45.0
1794 Male, age 80, right hemisphere 50.2
1841 Female, age 85, right hemisphere 46.9
1847 Female, age 91, left hemisphere 46.2
2521 Female, age 94, right hemisphere 43.4
2848 Male, age 76, right hemisphere 38.1
Subiculum
nTPM: 44.1
2042 Male, age 76, both hemispheres 49.1
1977 Female, age 85, both hemispheres 46.1
2619 Male, age 74, both hemispheres 46.1
2729 Female, age 91, right hemisphere 45.1
1901 Male, age 80, both hemispheres 44.6
2438 Female, age 94, left hemisphere 33.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.8
Samples: 197

Max nTPM: 81.2
Min nTPM: 27.2
Std nTPM: 7.6
Median nTPM: 44.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 81.2
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 69.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 68.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 67.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 63.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 63.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 61.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 60.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 59.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 59.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 59.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.5
FF:10169-103B7 60 years, female 75.3
FF:10153-102I9 76 years, female 55.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 72.9
Samples: 4

Max nTPM: 86.4
Min nTPM: 58.7
Sample A Female 86.4
Sample B Female 70.2
Sample C Male 76.4
Sample D Male 58.7
Entorhinal cortex
nTPM: 57.6
Samples: 4

Max nTPM: 66.0
Min nTPM: 48.9
Sample A Female 57.1
Sample B Female 66.0
Sample C Male 58.5
Sample D Male 48.9
Subiculum
nTPM: 61.9
Samples: 4

Max nTPM: 71.1
Min nTPM: 56.7
Sample A Female 71.1
Sample B Female 58.9
Sample C Male 56.7
Sample D Male 60.9
Ventral hippocampus
nTPM: 65.2
Samples: 4

Max nTPM: 72.8
Min nTPM: 56.5
Sample A Female 72.8
Sample B Female 56.5
Sample C Male 65.5
Sample D Male 65.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 203.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 156.9
Samples: 4

Max nTPM: 169.9
Min nTPM: 148.3
Sample A Male 148.3
Sample B Male 155.4
Sample C Female 169.9
Sample D Female 153.8
Hippocampal formation
nTPM: 203.7
Samples: 4

Max nTPM: 224.7
Min nTPM: 184.7
Sample A Male 200.4
Sample B Male 205.0
Sample C Female 224.7
Sample D Female 184.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.2
641530 Antisense, RP_040914_01_E10, Mouse strain C57BL/6J (56 days, male) 19.6
74658110 Antisense, RP_060220_02_C06, Mouse strain C57BL/6J (56 days, male) 14.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.