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CC2D1A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:11.8 nTPM
HPA:11.8 nTPM
GTEx:31.0 nTPM
FANTOM5:34.2 Scaled Tags Per Million
Pig:12.8 nTPM
Mouse:18.0 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005436Antibody CAB015220
Glial cells LowLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.8
Sample id Sample description nTPM
Hippocampus
nTPM: 10.7
2621 Female, age 67, right hemisphere 11.8
2529 Female, age 94, left hemisphere 11.1
2148 Female, age 91, left hemisphere 11.0
1911 Female, age 85, right hemisphere 10.7
1898 Male, age 80, left hemisphere 10.0
1855 Male, age 76, left hemisphere 9.4
Dentate gyrus
nTPM: 10.3
2530 Female, age 94, left hemisphere 11.8
2531 Female, age 67, both hemispheres 11.0
2246 Female, age 85, both hemispheres 10.5
1927 Female, age 91, both hemispheres 9.8
2528 Male, age 74, both hemispheres 9.6
2010 Male, age 76, both hemispheres 9.4
Entorhinal gyrus
nTPM: 11.8
2764 Male, age 80, right hemisphere 13.0
2686 Male, age 75, right hemisphere 12.9
2613 Female, age 94, left hemisphere 12.4
1787 Male, age 76, left hemisphere 11.7
1938 Female, age 85, left hemisphere 11.0
2117 Female, age 91, right hemisphere 9.9
Hippocampus, CA1
nTPM: 10.2
2527 Male, age 74, both hemispheres 10.8
2749 Male, age 80, left hemisphere 10.4
2082 Female, age 91, right hemisphere 10.2
1873 Female, age 85, both hemispheres 9.8
2045 Male, age 76, both hemispheres 9.7
Hippocampus, CA2
nTPM: 10.2
2437 Female, age 94, left hemisphere 11.4
1892 Male, age 76, both hemispheres 10.4
1940 Female, age 85, left hemisphere 10.1
1963 Male, age 80, left hemisphere 9.9
2113 Female, age 91, right hemisphere 9.9
2249 Male, age 74, both hemispheres 9.7
Hippocampus, CA3
nTPM: 10.5
2861 Female, age 67, both hemispheres 11.3
2620 Female, age 94, left hemisphere 11.1
2436 Male, age 74, both hemispheres 10.5
2137 Male, age 80, left hemisphere 10.1
1867 Male, age 76, both hemispheres 10.0
1891 Female, age 85, both hemispheres 9.9
Parahippocampal cortex
nTPM: 11.2
2622 Female, age 67, right hemisphere 13.3
1850 Male, age 80, both hemispheres 11.4
2532 Female, age 72, left hemisphere 11.4
2692 Male, age 74, both hemispheres 11.3
1933 Female, age 85, both hemispheres 11.2
2693 Female, age 94, both hemispheres 10.9
2018 Male, age 76, both hemispheres 10.7
1990 Female, age 91, right hemisphere 10.6
2245 Female, age 91, both hemispheres 10.6
2250 Female, age 67, right hemisphere 10.6
Perirhinal gyrus
nTPM: 11.1
1794 Male, age 80, right hemisphere 12.2
2848 Male, age 76, right hemisphere 11.2
2521 Female, age 94, right hemisphere 10.8
1841 Female, age 85, right hemisphere 10.7
1847 Female, age 91, left hemisphere 10.7
Subiculum
nTPM: 10.3
2619 Male, age 74, both hemispheres 10.8
1901 Male, age 80, both hemispheres 10.5
2438 Female, age 94, left hemisphere 10.3
1977 Female, age 85, both hemispheres 10.2
2729 Female, age 91, right hemisphere 10.1
2042 Male, age 76, both hemispheres 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.0
Samples: 197

Max nTPM: 58.3
Min nTPM: 13.5
Std nTPM: 9.0
Median nTPM: 29.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 58.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 57.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 55.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 55.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 55.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 52.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 52.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 52.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 50.6
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 50.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 50.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.2
FF:10153-102I9 76 years, female 40.1
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 13.2
Min nTPM: 8.5
Sample A Female 8.5
Sample B Female 13.2
Sample C Male 12.3
Sample D Male 11.5
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 12.9
Min nTPM: 8.2
Sample A Female 8.2
Sample B Female 10.5
Sample C Male 12.9
Sample D Male 11.2
Subiculum
nTPM: 12.4
Samples: 4

Max nTPM: 14.8
Min nTPM: 10.0
Sample A Female 10.0
Sample B Female 12.8
Sample C Male 14.8
Sample D Male 12.0
Ventral hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 18.3
Min nTPM: 8.0
Sample A Female 8.0
Sample B Female 10.6
Sample C Male 18.3
Sample D Male 14.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 20.4
Min nTPM: 16.6
Sample A Male 16.7
Sample B Male 18.4
Sample C Female 16.6
Sample D Female 20.4
Hippocampal formation
nTPM: 15.5
Samples: 4

Max nTPM: 16.8
Min nTPM: 13.9
Sample A Male 13.9
Sample B Male 16.7
Sample C Female 14.4
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
70430852 Antisense, RP_050614_02_B12, Mouse strain C57BL/6J (56 days, male) 5.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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