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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:131.8 nTPM
HPA:131.8 nTPM
GTEx:96.0 nTPM
FANTOM5:310.5 Scaled Tags Per Million
Pig:99.0 nTPM
Mouse:177.6 nTPM
Allen mouse:17.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006889Antibody CAB011498
Glial cells LowMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 131.8
Sample id Sample description nTPM
Hippocampus
nTPM: 110.4
1855 Male, age 76, left hemisphere 135.2
1898 Male, age 80, left hemisphere 122.6
1911 Female, age 85, right hemisphere 118.0
2621 Female, age 67, right hemisphere 114.9
2148 Female, age 91, left hemisphere 94.6
2529 Female, age 94, left hemisphere 77.2
Dentate gyrus
nTPM: 118.7
2010 Male, age 76, both hemispheres 162.5
2530 Female, age 94, left hemisphere 137.0
1927 Female, age 91, both hemispheres 127.8
2531 Female, age 67, both hemispheres 103.3
2246 Female, age 85, both hemispheres 92.3
2528 Male, age 74, both hemispheres 89.6
Entorhinal gyrus
nTPM: 81.1
2117 Female, age 91, right hemisphere 102.1
1938 Female, age 85, left hemisphere 89.1
2764 Male, age 80, right hemisphere 84.1
1787 Male, age 76, left hemisphere 78.9
2613 Female, age 94, left hemisphere 75.7
2686 Male, age 75, right hemisphere 56.9
Hippocampus, CA1
nTPM: 131.8
2749 Male, age 80, left hemisphere 235.9
1873 Female, age 85, both hemispheres 138.6
2045 Male, age 76, both hemispheres 129.3
2527 Male, age 74, both hemispheres 85.3
2082 Female, age 91, right hemisphere 69.8
Hippocampus, CA2
nTPM: 110.0
1963 Male, age 80, left hemisphere 173.6
1892 Male, age 76, both hemispheres 149.8
1940 Female, age 85, left hemisphere 87.7
2249 Male, age 74, both hemispheres 85.7
2113 Female, age 91, right hemisphere 82.5
2437 Female, age 94, left hemisphere 81.0
Hippocampus, CA3
nTPM: 120.0
2137 Male, age 80, left hemisphere 204.2
1867 Male, age 76, both hemispheres 122.2
1891 Female, age 85, both hemispheres 121.7
2620 Female, age 94, left hemisphere 107.5
2861 Female, age 67, both hemispheres 94.2
2436 Male, age 74, both hemispheres 70.4
Parahippocampal cortex
nTPM: 72.9
2018 Male, age 76, both hemispheres 99.8
1990 Female, age 91, right hemisphere 82.3
2245 Female, age 91, both hemispheres 80.9
1850 Male, age 80, both hemispheres 80.7
1933 Female, age 85, both hemispheres 72.9
2532 Female, age 72, left hemisphere 72.1
2693 Female, age 94, both hemispheres 71.8
2692 Male, age 74, both hemispheres 71.0
2250 Female, age 67, right hemisphere 57.4
2622 Female, age 67, right hemisphere 39.7
Perirhinal gyrus
nTPM: 72.9
2521 Female, age 94, right hemisphere 84.1
1841 Female, age 85, right hemisphere 74.0
2848 Male, age 76, right hemisphere 73.3
1847 Female, age 91, left hemisphere 67.6
1794 Male, age 80, right hemisphere 65.4
Subiculum
nTPM: 107.2
1901 Male, age 80, both hemispheres 151.1
2042 Male, age 76, both hemispheres 147.7
1977 Female, age 85, both hemispheres 102.3
2729 Female, age 91, right hemisphere 88.8
2438 Female, age 94, left hemisphere 87.2
2619 Male, age 74, both hemispheres 66.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 96.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 96.0
Samples: 197

Max nTPM: 182.1
Min nTPM: 28.4
Std nTPM: 32.4
Median nTPM: 94.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 182.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 166.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 164.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 163.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 161.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 159.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 158.7
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 157.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 155.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 154.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 151.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 310.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 310.5
FF:10169-103B7 60 years, female 417.4
FF:10153-102I9 76 years, female 203.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 99.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 96.1
Samples: 4

Max nTPM: 117.4
Min nTPM: 74.4
Sample A Female 117.4
Sample B Female 100.5
Sample C Male 92.2
Sample D Male 74.4
Entorhinal cortex
nTPM: 99.0
Samples: 4

Max nTPM: 104.8
Min nTPM: 96.5
Sample A Female 97.8
Sample B Female 104.8
Sample C Male 96.9
Sample D Male 96.5
Subiculum
nTPM: 70.4
Samples: 4

Max nTPM: 82.4
Min nTPM: 62.1
Sample A Female 82.4
Sample B Female 66.7
Sample C Male 62.1
Sample D Male 70.5
Ventral hippocampus
nTPM: 75.1
Samples: 4

Max nTPM: 106.4
Min nTPM: 51.3
Sample A Female 72.3
Sample B Female 51.3
Sample C Male 70.3
Sample D Male 106.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 177.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 155.1
Samples: 4

Max nTPM: 195.4
Min nTPM: 139.4
Sample A Male 146.0
Sample B Male 139.6
Sample C Female 139.4
Sample D Female 195.4
Hippocampal formation
nTPM: 177.6
Samples: 4

Max nTPM: 233.3
Min nTPM: 137.8
Sample A Male 137.8
Sample B Male 195.7
Sample C Female 233.3
Sample D Female 143.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
69288327 Antisense, RP_050331_04_E09, Mouse strain C57BL/6J (56 days, male) 17.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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