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COX6C
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:191.8 nTPM
HPA:191.8 nTPM
GTEx:368.5 nTPM
FANTOM5:485.5 Scaled Tags Per Million
Mouse:1058.3 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014295Antibody CAB016244
Glial cells Not detectedLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 191.8
Sample id Sample description nTPM
Hippocampus
nTPM: 181.4
1898 Male, age 80, left hemisphere 194.8
1855 Male, age 76, left hemisphere 182.2
2529 Female, age 94, left hemisphere 181.3
1911 Female, age 85, right hemisphere 177.8
2148 Female, age 91, left hemisphere 177.2
2621 Female, age 67, right hemisphere 175.4
Dentate gyrus
nTPM: 180.8
2530 Female, age 94, left hemisphere 188.9
1927 Female, age 91, both hemispheres 188.5
2010 Male, age 76, both hemispheres 182.5
2246 Female, age 85, both hemispheres 176.4
2528 Male, age 74, both hemispheres 174.3
2531 Female, age 67, both hemispheres 174.2
Entorhinal gyrus
nTPM: 176.5
1938 Female, age 85, left hemisphere 185.3
2764 Male, age 80, right hemisphere 184.1
2117 Female, age 91, right hemisphere 174.8
1787 Male, age 76, left hemisphere 174.5
2686 Male, age 75, right hemisphere 172.9
2613 Female, age 94, left hemisphere 167.2
Hippocampus, CA1
nTPM: 191.8
2749 Male, age 80, left hemisphere 221.0
1873 Female, age 85, both hemispheres 190.3
2527 Male, age 74, both hemispheres 189.2
2082 Female, age 91, right hemisphere 180.1
2045 Male, age 76, both hemispheres 178.2
Hippocampus, CA2
nTPM: 187.0
1892 Male, age 76, both hemispheres 198.2
2249 Male, age 74, both hemispheres 194.6
1963 Male, age 80, left hemisphere 186.9
2437 Female, age 94, left hemisphere 183.7
2113 Female, age 91, right hemisphere 182.2
1940 Female, age 85, left hemisphere 176.4
Hippocampus, CA3
nTPM: 185.5
2436 Male, age 74, both hemispheres 204.3
2137 Male, age 80, left hemisphere 197.8
1867 Male, age 76, both hemispheres 188.9
1891 Female, age 85, both hemispheres 179.8
2861 Female, age 67, both hemispheres 176.0
2620 Female, age 94, left hemisphere 166.3
Parahippocampal cortex
nTPM: 179.0
2250 Female, age 67, right hemisphere 191.0
2245 Female, age 91, both hemispheres 188.4
2018 Male, age 76, both hemispheres 185.4
1850 Male, age 80, both hemispheres 184.4
1990 Female, age 91, right hemisphere 180.4
1933 Female, age 85, both hemispheres 180.3
2532 Female, age 72, left hemisphere 173.4
2622 Female, age 67, right hemisphere 171.9
2693 Female, age 94, both hemispheres 170.6
2692 Male, age 74, both hemispheres 164.7
Perirhinal gyrus
nTPM: 182.6
2521 Female, age 94, right hemisphere 188.3
1841 Female, age 85, right hemisphere 185.5
1847 Female, age 91, left hemisphere 184.2
1794 Male, age 80, right hemisphere 181.2
2848 Male, age 76, right hemisphere 173.6
Subiculum
nTPM: 174.9
1901 Male, age 80, both hemispheres 182.9
1977 Female, age 85, both hemispheres 178.1
2042 Male, age 76, both hemispheres 176.7
2729 Female, age 91, right hemisphere 176.2
2438 Female, age 94, left hemisphere 172.4
2619 Male, age 74, both hemispheres 163.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 368.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 368.5
Samples: 197

Max nTPM: 1287.6
Min nTPM: 102.0
Std nTPM: 169.0
Median nTPM: 343.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1287.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 916.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 802.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 796.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 746.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 743.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 729.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 706.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 703.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 694.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 684.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 485.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 485.5
FF:10169-103B7 60 years, female 696.8
FF:10153-102I9 76 years, female 274.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1058.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1058.3
Samples: 4

Max nTPM: 1144.2
Min nTPM: 1004.5
Sample A Male 1016.4
Sample B Male 1068.0
Sample C Female 1144.2
Sample D Female 1004.5
Hippocampal formation
nTPM: 1053.3
Samples: 4

Max nTPM: 1167.7
Min nTPM: 981.2
Sample A Male 1167.7
Sample B Male 981.2
Sample C Female 1070.2
Sample D Female 994.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
74641307 Antisense, RP_060220_05_H03, Mouse strain C57BL/6J (56 days, male) 8.3
71280952 Antisense, RP_050818_01_H08, Mouse strain C57BL/6J (56 days, male) 5.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.