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ASF1A
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.4 nTPM
HPA:12.4 nTPM
GTEx:12.7 nTPM
FANTOM5:42.0 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:17.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.4
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
1855 Male, age 76, left hemisphere 12.5
1898 Male, age 80, left hemisphere 12.4
1911 Female, age 85, right hemisphere 12.3
2529 Female, age 94, left hemisphere 11.8
2621 Female, age 67, right hemisphere 11.2
2148 Female, age 91, left hemisphere 10.8
Dentate gyrus
nTPM: 11.5
2246 Female, age 85, both hemispheres 12.1
2528 Male, age 74, both hemispheres 12.1
2010 Male, age 76, both hemispheres 12.0
1927 Female, age 91, both hemispheres 11.9
2530 Female, age 94, left hemisphere 10.7
2531 Female, age 67, both hemispheres 10.0
Entorhinal gyrus
nTPM: 11.5
1938 Female, age 85, left hemisphere 13.0
2117 Female, age 91, right hemisphere 12.7
1787 Male, age 76, left hemisphere 11.8
2764 Male, age 80, right hemisphere 11.2
2686 Male, age 75, right hemisphere 10.8
2613 Female, age 94, left hemisphere 9.7
Hippocampus, CA1
nTPM: 11.7
2527 Male, age 74, both hemispheres 12.9
1873 Female, age 85, both hemispheres 12.3
2082 Female, age 91, right hemisphere 11.4
2045 Male, age 76, both hemispheres 11.2
2749 Male, age 80, left hemisphere 10.8
Hippocampus, CA2
nTPM: 12.1
2249 Male, age 74, both hemispheres 13.3
2113 Female, age 91, right hemisphere 12.4
1940 Female, age 85, left hemisphere 12.0
1892 Male, age 76, both hemispheres 11.8
1963 Male, age 80, left hemisphere 11.8
2437 Female, age 94, left hemisphere 11.5
Hippocampus, CA3
nTPM: 11.3
1891 Female, age 85, both hemispheres 12.7
2436 Male, age 74, both hemispheres 12.5
1867 Male, age 76, both hemispheres 11.9
2137 Male, age 80, left hemisphere 10.9
2620 Female, age 94, left hemisphere 9.9
2861 Female, age 67, both hemispheres 9.9
Parahippocampal cortex
nTPM: 11.9
2250 Female, age 67, right hemisphere 12.8
1933 Female, age 85, both hemispheres 12.7
1850 Male, age 80, both hemispheres 12.3
1990 Female, age 91, right hemisphere 12.3
2692 Male, age 74, both hemispheres 11.8
2693 Female, age 94, both hemispheres 11.8
2245 Female, age 91, both hemispheres 11.7
2018 Male, age 76, both hemispheres 11.6
2532 Female, age 72, left hemisphere 11.6
2622 Female, age 67, right hemisphere 11.1
Perirhinal gyrus
nTPM: 12.3
1841 Female, age 85, right hemisphere 13.4
1847 Female, age 91, left hemisphere 12.6
1794 Male, age 80, right hemisphere 12.0
2521 Female, age 94, right hemisphere 11.9
2848 Male, age 76, right hemisphere 11.6
Subiculum
nTPM: 12.4
2438 Female, age 94, left hemisphere 13.5
2729 Female, age 91, right hemisphere 12.6
1977 Female, age 85, both hemispheres 12.5
1901 Male, age 80, both hemispheres 12.1
2042 Male, age 76, both hemispheres 12.0
2619 Male, age 74, both hemispheres 11.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.7
Samples: 197

Max nTPM: 24.3
Min nTPM: 5.5
Std nTPM: 2.9
Median nTPM: 12.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 24.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 22.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 20.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 20.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 19.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 19.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 19.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 19.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 19.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 19.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 18.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.0
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 39.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.8
Sample A Female 12.0
Sample B Female 9.1
Sample C Male 9.5
Sample D Male 8.8
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 11.4
Min nTPM: 7.4
Sample A Female 7.7
Sample B Female 11.4
Sample C Male 9.2
Sample D Male 7.4
Subiculum
nTPM: 8.3
Samples: 4

Max nTPM: 8.9
Min nTPM: 7.6
Sample A Female 8.9
Sample B Female 8.1
Sample C Male 7.6
Sample D Male 8.5
Ventral hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.9
Sample A Female 8.7
Sample B Female 8.3
Sample C Male 7.9
Sample D Male 8.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 19.3
Min nTPM: 12.4
Sample A Male 19.3
Sample B Male 17.4
Sample C Female 18.8
Sample D Female 12.4
Hippocampal formation
nTPM: 18.0
Samples: 4

Max nTPM: 19.2
Min nTPM: 14.8
Sample A Male 18.8
Sample B Male 14.8
Sample C Female 19.2
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68523372 Antisense, RP_050118_02_F05, Mouse strain C57BL/6J (56 days, male) 0.0

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