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RAB3GAP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:24.5 nTPM
HPA:24.5 nTPM
GTEx:16.8 nTPM
FANTOM5:63.6 Scaled Tags Per Million
Pig:19.0 nTPM
Mouse:49.9 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034494
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.5
Sample id Sample description nTPM
Hippocampus
nTPM: 17.2
1898 Male, age 80, left hemisphere 22.2
2529 Female, age 94, left hemisphere 17.2
1855 Male, age 76, left hemisphere 16.9
2621 Female, age 67, right hemisphere 16.1
1911 Female, age 85, right hemisphere 15.7
2148 Female, age 91, left hemisphere 15.1
Dentate gyrus
nTPM: 16.7
1927 Female, age 91, both hemispheres 18.7
2010 Male, age 76, both hemispheres 17.9
2528 Male, age 74, both hemispheres 16.8
2246 Female, age 85, both hemispheres 16.2
2530 Female, age 94, left hemisphere 15.8
2531 Female, age 67, both hemispheres 14.6
Entorhinal gyrus
nTPM: 20.1
1938 Female, age 85, left hemisphere 23.1
2764 Male, age 80, right hemisphere 22.1
1787 Male, age 76, left hemisphere 20.6
2686 Male, age 75, right hemisphere 19.2
2613 Female, age 94, left hemisphere 18.1
2117 Female, age 91, right hemisphere 17.6
Hippocampus, CA1
nTPM: 18.1
2749 Male, age 80, left hemisphere 22.1
2527 Male, age 74, both hemispheres 18.0
1873 Female, age 85, both hemispheres 17.6
2082 Female, age 91, right hemisphere 17.4
2045 Male, age 76, both hemispheres 15.4
Hippocampus, CA2
nTPM: 18.4
1892 Male, age 76, both hemispheres 20.8
1963 Male, age 80, left hemisphere 18.8
1940 Female, age 85, left hemisphere 18.2
2249 Male, age 74, both hemispheres 18.1
2113 Female, age 91, right hemisphere 17.6
2437 Female, age 94, left hemisphere 17.2
Hippocampus, CA3
nTPM: 16.9
2137 Male, age 80, left hemisphere 19.2
1867 Male, age 76, both hemispheres 18.2
1891 Female, age 85, both hemispheres 17.9
2436 Male, age 74, both hemispheres 17.5
2861 Female, age 67, both hemispheres 14.6
2620 Female, age 94, left hemisphere 14.0
Parahippocampal cortex
nTPM: 20.7
1850 Male, age 80, both hemispheres 26.9
1933 Female, age 85, both hemispheres 22.6
2693 Female, age 94, both hemispheres 22.5
1990 Female, age 91, right hemisphere 22.1
2250 Female, age 67, right hemisphere 20.4
2532 Female, age 72, left hemisphere 20.3
2018 Male, age 76, both hemispheres 19.3
2245 Female, age 91, both hemispheres 19.0
2692 Male, age 74, both hemispheres 18.0
2622 Female, age 67, right hemisphere 16.0
Perirhinal gyrus
nTPM: 24.5
1841 Female, age 85, right hemisphere 26.6
1847 Female, age 91, left hemisphere 25.5
1794 Male, age 80, right hemisphere 24.5
2848 Male, age 76, right hemisphere 23.8
2521 Female, age 94, right hemisphere 22.0
Subiculum
nTPM: 17.9
1977 Female, age 85, both hemispheres 20.4
1901 Male, age 80, both hemispheres 20.0
2438 Female, age 94, left hemisphere 18.2
2619 Male, age 74, both hemispheres 17.3
2729 Female, age 91, right hemisphere 16.0
2042 Male, age 76, both hemispheres 15.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.8
Samples: 197

Max nTPM: 28.4
Min nTPM: 10.2
Std nTPM: 3.1
Median nTPM: 16.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 28.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 26.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 26.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 25.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 25.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 25.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 24.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 24.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 23.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 23.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 22.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.6
FF:10169-103B7 60 years, female 75.3
FF:10153-102I9 76 years, female 51.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 19.7
Min nTPM: 15.9
Sample A Female 19.7
Sample B Female 18.3
Sample C Male 19.2
Sample D Male 15.9
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 19.8
Min nTPM: 18.1
Sample A Female 19.3
Sample B Female 19.8
Sample C Male 19.0
Sample D Male 18.1
Subiculum
nTPM: 17.3
Samples: 4

Max nTPM: 18.1
Min nTPM: 16.4
Sample A Female 18.1
Sample B Female 16.4
Sample C Male 16.9
Sample D Male 17.9
Ventral hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 21.8
Min nTPM: 16.5
Sample A Female 21.8
Sample B Female 17.0
Sample C Male 18.8
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.9
Samples: 4

Max nTPM: 55.0
Min nTPM: 46.6
Sample A Male 49.4
Sample B Male 48.7
Sample C Female 46.6
Sample D Female 55.0
Hippocampal formation
nTPM: 46.5
Samples: 4

Max nTPM: 48.3
Min nTPM: 43.6
Sample A Male 46.1
Sample B Male 48.3
Sample C Female 48.0
Sample D Female 43.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
68924661 Antisense, RP_050303_02_G07, Mouse strain C57BL/6J (56 days, male) 9.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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