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PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:69.3 nTPM
HPA:69.3 nTPM
FANTOM5:108.5 Scaled Tags Per Million
Pig:8.8 nTPM
Mouse:21.2 nTPM
Allen mouse:0.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 69.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 45.1
2301 Female, age 85, both hemispheres 45.9
2090 Male, age 80, both hemispheres 45.6
2188 Female, age 91, both hemispheres 45.2
1984 Male, age 76, both hemispheres 43.7
Area postrema
nTPM: 69.3
2799 Male, age 61, both hemispheres 105.2
2306 Male, age 80, both hemispheres 53.2
2054 Male, age 76, both hemispheres 49.4
Cuneate nuclei
nTPM: 41.7
2131 Male, age 76, both hemispheres 44.2
2376 Male, age 61, both hemispheres 42.5
2381 Male, age 80, both hemispheres 38.6
Dorsal cochlear nucleus
nTPM: 52.7
2802 Male, age 74, right hemisphere 64.2
2378 Male, age 80, both hemispheres 58.2
2187 Female, age 91, both hemispheres 48.3
2370 Male, age 61, both hemispheres 46.5
2058 Male, age 76, both hemispheres 46.4
Dorsal medullary reticular nucleus
nTPM: 49.4
2373 Male, age 61, both hemispheres 56.8
2088 Male, age 76, both hemispheres 46.3
2040 Female, age 85, both hemispheres 45.0
Dorsal motor vagal complex
nTPM: 48.0
2797 Male, age 61, both hemispheres 72.1
2185 Male, age 76, both hemispheres 57.2
2807 Female, age 85, both hemispheres 44.7
2133 Female, age 91, both hemispheres 44.0
2643 Male, age 74, both hemispheres 43.2
2844 Male, age 55, unknown 42.2
2000 Male, age 74, unknown 42.1
2813 Female, age 72, unknown 38.5
Dorsal tegmental nucleus
nTPM: 62.3
2358 Male, age 61, both hemispheres 77.0
2083 Male, age 80, both hemispheres 62.0
1936 Male, age 76, left hemisphere 56.5
2326 Male, age 74, both hemispheres 53.6
Dorsolateral tegmental area
nTPM: 59.5
2337 Male, age 61, both hemispheres 81.4
2654 Male, age 80, both hemispheres 63.7
2751 Female, age 85, both hemispheres 52.6
2360 Male, age 74, both hemispheres 51.4
2141 Male, age 76, both hemispheres 48.6
Gigantocellular reticular nuclei, medullary
nTPM: 49.3
2314 Male, age 61, both hemispheres 57.1
2310 Male, age 80, both hemispheres 54.0
1876 Female, age 85, both hemispheres 50.1
2387 Female, age 91, both hemispheres 48.8
2462 Male, age 74, both hemispheres 46.2
2022 Male, age 76, right hemisphere 39.4
Gigantocellular reticular nuclei, pars
nTPM: 47.2
2084 Female, age 85, both hemispheres 49.9
2330 Male, age 80, both hemispheres 48.3
2706 Male, age 80, both hemispheres 47.0
2336 Male, age 61, both hemispheres 45.8
2168 Male, age 76, both hemispheres 44.7
Inferior olive
nTPM: 56.1
2178 Male, age 61, both hemispheres 70.2
2379 Male, age 80, both hemispheres 56.9
2085 Female, age 85, both hemispheres 53.3
2563 Male, age 74, both hemispheres 50.4
2628 Female, age 91, both hemispheres 49.9
Kolliker-Fuse nucleus
nTPM: 52.9
2315 Male, age 76, right hemisphere 64.9
2163 Male, age 80, both hemispheres 50.0
2793 Female, age 91, left hemisphere 43.7
Lateral lemniscal nuclei
nTPM: 44.4
2453 Male, age 74, right hemisphere 47.2
2320 Female, age 91, left hemisphere 47.1
2746 Female, age 85, left hemisphere 45.2
2169 Male, age 76, both hemispheres 43.7
2036 Male, age 80, both hemispheres 39.1
Lateral medullary reticular nucleus
nTPM: 45.6
2190 Female, age 85, both hemispheres 51.6
2374 Male, age 61, both hemispheres 50.6
2804 Female, age 91, both hemispheres 47.0
2852 Male, age 80, both hemispheres 45.2
2044 Male, age 76, both hemispheres 43.7
2305 Male, age 74, both hemispheres 35.5
Lateral parabrachial nucleus
nTPM: 44.4
2792 Male, age 76, both hemispheres 49.1
2013 Male, age 80, both hemispheres 45.5
2139 Female, age 85, right hemisphere 44.5
2790 Male, age 61, both hemispheres 38.6
Lateral vestibular nucleus
nTPM: 46.2
2311 Male, age 80, both hemispheres 49.7
2184 Male, age 76, both hemispheres 42.7
Locus coeruleus
nTPM: 41.7
2123 Female, age 91, both hemispheres 47.1
1980 Male, age 76, both hemispheres 46.6
2162 Male, age 80, both hemispheres 43.0
2317 Female, age 72, unknown 40.5
2720 Male, age 74, both hemispheres 39.8
2014 Male, age 55, unknown 39.6
2788 Male, age 74, unknown 35.2
Medial olivary nucleus
nTPM: 52.7
1943 Male, age 61, both hemispheres 55.3
1962 Male, age 76, both hemispheres 54.0
2138 Female, age 91, both hemispheres 51.7
2851 Male, age 80, both hemispheres 49.7
Medial parabrachial nucleus
nTPM: 46.0
2170 Female, age 91, both hemispheres 49.7
2463 Female, age 85, right hemisphere 47.6
2786 Male, age 76, both hemispheres 46.3
2156 Male, age 61, both hemispheres 43.2
2854 Male, age 80, both hemispheres 43.2
Medial periolivary nuclei
nTPM: 44.4
2063 Male, age 76, both hemispheres 48.0
2081 Male, age 80, both hemispheres 46.8
2458 Female, age 91, both hemispheres 45.9
2171 Female, age 85, both hemispheres 43.1
2791 Male, age 74, right hemisphere 38.2
Medial vestibular nucleus
nTPM: 47.2
2093 Male, age 80, both hemispheres 51.6
2134 Male, age 76, both hemispheres 51.2
2743 Female, age 85, both hemispheres 49.0
2624 Male, age 61, both hemispheres 46.6
2803 Female, age 91, both hemispheres 45.4
2801 Male, age 74, both hemispheres 39.4
Motor facial nucleus
nTPM: 47.0
2795 Female, age 91, both hemispheres 60.0
2126 Male, age 61, both hemispheres 50.1
2062 Male, age 76, both hemispheres 49.5
2327 Male, age 80, both hemispheres 44.7
2697 Female, age 85, both hemispheres 39.7
2365 Male, age 74, right hemisphere 38.3
Motor hypoglossal nucleus
nTPM: 46.3
2125 Female, age 91, both hemispheres 53.5
2277 Male, age 76, both hemispheres 47.6
2182 Male, age 80, both hemispheres 45.7
2132 Female, age 85, both hemispheres 42.6
2461 Male, age 61, both hemispheres 42.1
Motor trigeminal nucleus
nTPM: 48.1
2560 Male, age 74, both hemispheres 52.5
2321 Female, age 91, both hemispheres 50.6
2309 Male, age 76, both hemispheres 50.1
2335 Male, age 61, both hemispheres 44.1
2079 Male, age 80, both hemispheres 43.3
Nuclei of the trapezoid body
nTPM: 44.7
2368 Female, age 91, both hemispheres 50.3
1983 Male, age 76, both hemispheres 47.3
2735 Female, age 85, both hemispheres 45.0
2166 Male, age 80, both hemispheres 41.8
2159 Male, age 61, both hemispheres 39.3
Nucleus ambiguus
nTPM: 67.3
2071 Male, age 76, both hemispheres 74.4
2096 Female, age 85, both hemispheres 60.2
Nucleus cuneatus
nTPM: 50.6
2805 Female, age 91, both hemispheres 60.2
2808 Female, age 85, both hemispheres 51.8
2564 Male, age 74, both hemispheres 50.8
2100 Male, age 76, both hemispheres 50.0
2562 Male, age 61, both hemispheres 46.4
2380 Male, age 80, both hemispheres 44.2
Nucleus gracilis
nTPM: 45.9
2299 Female, age 85, both hemispheres 56.3
2382 Male, age 80, both hemispheres 40.9
2627 Male, age 74, both hemispheres 40.6
Nucleus raphe magnus
nTPM: 46.4
2051 Male, age 76, both hemispheres 52.6
2459 Female, age 91, both hemispheres 48.7
2328 Male, age 80, both hemispheres 47.8
2455 Male, age 74, both hemispheres 44.7
2172 Female, age 85, both hemispheres 43.2
2160 Male, age 61, both hemispheres 41.4
Nucleus raphe obscurus
nTPM: 50.8
2142 Male, age 76, midline 59.7
2800 Male, age 61, midline 47.6
2845 Female, age 85, midline 45.0
Nucleus raphe pallidus
nTPM: 67.0
1924 Male, age 61, midline 91.5
2183 Male, age 80, midline 57.4
2145 Male, age 76, midline 51.9
Nucleus tractus solitarii
nTPM: 44.0
2307 Male, age 80, both hemispheres 46.8
2656 Male, age 76, both hemispheres 43.6
2144 Female, age 91, right hemisphere 42.9
2191 Female, age 85, both hemispheres 42.6
Paramedian reticular nucleus
nTPM: 46.3
2057 Male, age 80, both hemispheres 54.7
2050 Female, age 85, both hemispheres 46.2
2052 Male, age 76, both hemispheres 42.5
2313 Male, age 61, both hemispheres 41.7
Parvicellular reticular nuclei
nTPM: 55.1
2119 Male, age 80, both hemispheres 66.0
2095 Male, age 76, both hemispheres 51.2
2558 Male, age 74, both hemispheres 48.1
Parvicellular reticular nuclei, medullary
nTPM: 49.8
2091 Female, age 85, both hemispheres 51.1
2189 Female, age 91, both hemispheres 50.6
2181 Male, age 80, left hemisphere 47.7
Peritrigeminal nucleus
nTPM: 48.0
2136 Male, age 76, both hemispheres 49.9
2067 Female, age 85, both hemispheres 48.3
2179 Male, age 61, both hemispheres 45.9
Pontine nuclei
nTPM: 47.2
1968 Male, age 76, left hemisphere 54.3
2454 Male, age 74, left hemisphere 53.7
2319 Female, age 91, both hemispheres 47.6
2115 Male, age 80, left hemisphere 47.2
2787 Female, age 85, both hemispheres 46.8
2109 Female, age 72, unknown 44.0
2727 Male, age 61, right hemisphere 43.2
1863 Male, age 55, unknown 40.9
Pontine raphe nucleus
nTPM: 43.7
2122 Female, age 85, midline 44.0
2853 Male, age 76, midline 43.4
Posteroventral cochlear nucleus
nTPM: 46.2
2135 Female, age 91, both hemispheres 50.8
2371 Male, age 61, both hemispheres 47.3
2070 Male, age 76, both hemispheres 46.8
2341 Male, age 80, both hemispheres 44.4
2752 Female, age 85, both hemispheres 41.7
Prepositus hypoglossal nucleus
nTPM: 53.1
2086 Male, age 80, both hemispheres 58.2
2855 Female, age 85, right hemisphere 47.9
Principal sensory trigeminal nucleus
nTPM: 44.0
2324 Male, age 76, both hemispheres 50.5
2158 Male, age 61, both hemispheres 42.4
2008 Male, age 80, left hemisphere 42.2
2367 Female, age 91, left hemisphere 41.1
Reticular pontine nucleus, caudal
nTPM: 48.5
2559 Male, age 74, both hemispheres 52.1
2457 Female, age 91, both hemispheres 49.0
2092 Male, age 76, both hemispheres 47.8
2332 Male, age 80, right hemisphere 45.1
Reticular pontine nucleus, oral
nTPM: 48.9
1939 Male, age 80, both hemispheres 58.5
2167 Male, age 76, both hemispheres 49.2
2361 Male, age 74, both hemispheres 49.2
2012 Female, age 85, both hemispheres 44.9
2366 Female, age 91, both hemispheres 42.7
Reticulotegmental nucleus
nTPM: 52.1
2452 Male, age 74, both hemispheres 63.3
2333 Male, age 80, both hemispheres 55.8
2322 Female, age 91, both hemispheres 49.7
2325 Male, age 76, both hemispheres 39.6
Spinal trigeminal nucleus, caudal
nTPM: 44.0
2447 Male, age 76, both hemispheres 49.2
2308 Male, age 80, both hemispheres 48.3
2390 Female, age 91, both hemispheres 45.0
2312 Male, age 61, both hemispheres 42.7
2642 Male, age 74, both hemispheres 35.0
Spinal trigeminal nucleus, interpolar
nTPM: 42.1
2033 Male, age 80, both hemispheres 52.5
2389 Female, age 91, both hemispheres 41.7
2066 Male, age 76, right hemisphere 39.9
2625 Male, age 61, both hemispheres 38.3
2386 Female, age 85, both hemispheres 38.1
Spinal trigeminal nucleus, oral
nTPM: 46.0
2164 Male, age 80, both hemispheres 50.0
1978 Male, age 76, both hemispheres 47.4
2737 Female, age 85, both hemispheres 40.7
Spinal vestibular nucleus
nTPM: 49.9
2780 Male, age 80, both hemispheres 58.4
2748 Male, age 76, both hemispheres 52.8
2384 Male, age 74, both hemispheres 50.6
2186 Female, age 91, both hemispheres 48.4
2806 Female, age 85, both hemispheres 45.7
2796 Male, age 61, both hemispheres 43.5
Subcoeruleus area
nTPM: 49.9
2451 Male, age 74, both hemispheres 56.2
2369 Female, age 85, left hemisphere 52.6
2323 Female, age 91, left hemisphere 48.6
2089 Male, age 76, left hemisphere 46.1
1958 Male, age 80, both hemispheres 45.8
Superior olive
nTPM: 43.8
2020 Male, age 76, both hemispheres 48.6
2561 Female, age 91, both hemispheres 48.1
2329 Male, age 80, right hemisphere 46.3
1875 Female, age 85, both hemispheres 38.4
2364 Male, age 74, right hemisphere 37.7
Superior vestibular nucleus
nTPM: 52.8
2061 Male, age 76, both hemispheres 63.0
2015 Male, age 80, both hemispheres 51.9
2383 Male, age 74, both hemispheres 43.3
Ventral medullary reticular nucleus
nTPM: 50.8
2372 Male, age 61, both hemispheres 56.7
2060 Male, age 76, both hemispheres 44.9
Ventral periolivary nuclei
nTPM: 42.2
2794 Female, age 91, left hemisphere 46.3
2165 Male, age 80, both hemispheres 43.0
2130 Female, age 85, both hemispheres 40.0
2023 Male, age 76, both hemispheres 39.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 50.2
2180 Male, age 61, both hemispheres 53.9
2302 Female, age 91, both hemispheres 52.7
2741 Female, age 85, both hemispheres 51.3
2118 Male, age 80, both hemispheres 48.7
1986 Male, age 76, both hemispheres 44.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 46.7
2456 Female, age 91, both hemispheres 61.0
2161 Male, age 80, both hemispheres 50.8
2840 Female, age 85, both hemispheres 44.3
2449 Male, age 74, both hemispheres 43.1
1959 Male, age 76, both hemispheres 42.9
2359 Male, age 61, both hemispheres 38.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 58.7
FF:10182-103D2 60 years, female 90.3
FF:10165-103B3 76 years, female 27.1
Medulla oblongata
Scaled Tags Per Million: 108.5
FF:10174-103C3 60 years, female 145.4
FF:10038-101F2 18-64 years, mixed 120.7
FF:10155-103A2 76 years, female 59.5
Pons
Scaled Tags Per Million: 51.0
FF:10033-101E6 18-54 years, mixed 51.0

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 8.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 8.8
Samples: 4

Max nTPM: 13.6
Min nTPM: 4.9
Sample A Female 4.9
Sample B Female 7.1
Sample C Male 9.4
Sample D Male 13.6
Pons
nTPM: 7.6
Samples: 4

Max nTPM: 11.5
Min nTPM: 5.8
Sample A Female 5.8
Sample B Female 6.0
Sample C Male 7.1
Sample D Male 11.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 21.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 21.2
Samples: 4

Max nTPM: 23.8
Min nTPM: 19.0
Sample A Male 23.8
Sample B Male 19.0
Sample C Female 22.8
Sample D Female 19.1

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.5
71608229 Antisense, RP_050927_01_D01, Mouse strain C57BL/6J (56 days, male) 0.5
Pons
Expression energy: 0.2
71608229 Antisense, RP_050927_01_D01, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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