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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		98.541
RNA expressioni
Consensus:55.0 nTPM
HPA:55.0 nTPM
GTEx:143.8 nTPM
FANTOM5:179.6 Scaled Tags Per Million
Pig:79.9 nTPM
Mouse:265.3 nTPM
Allen mouse:24.2 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA042527
Amygdala mean intensity 98.541
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 86.682
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 74.613
Cortical amygdala 98.541
Central amygdala 74.198
Medial amygdaloid nucleus 75.189

AMYGDALA - HPA Brain RNA-seq
Max nTPM 55.0
Sample id Sample description nTPM
Amygdala
nTPM: 51.0
2814 Male, age 76, right hemisphere 124.7
2695 Female, age 67, right hemisphere 43.4
2517 Female, age 94, left hemisphere 32.8
2514 Male, age 75, right hemisphere 28.1
1987 Female, age 91, left hemisphere 26.0
Basal amygdala
nTPM: 47.4
1955 Male, age 76, both hemispheres 66.3
2243 Female, age 91, right hemisphere 59.8
2685 Female, age 94, left hemisphere 49.5
2110 Male, age 80, left hemisphere 38.3
2609 Male, age 75, right hemisphere 36.9
2827 Female, age 67, right hemisphere 33.7
Central amygdala
nTPM: 50.0
1905 Male, age 76, both hemispheres 106.7
2826 Female, age 94, left hemisphere 55.6
2239 Male, age 80, left hemisphere 40.3
2701 Female, age 91, right hemisphere 30.2
2515 Male, age 75, right hemisphere 17.1
Corticomedial amygdala
nTPM: 41.3
2242 Female, age 91, right hemisphere 48.4
2240 Male, age 76, both hemispheres 44.5
2429 Female, age 94, left hemisphere 44.4
2829 Male, age 80, left hemisphere 44.3
2535 Female, age 67, right hemisphere 43.9
2428 Male, age 75, right hemisphere 22.4
Lateral amygdala
nTPM: 44.8
1883 Male, age 76, both hemispheres 104.9
2534 Female, age 94, left hemisphere 61.1
2516 Male, age 75, right hemisphere 30.5
2830 Female, age 67, right hemisphere 26.6
2255 Female, age 91, right hemisphere 25.9
2256 Male, age 80, left hemisphere 20.0
Stria terminalis, bed nucleus
nTPM: 55.0
1974 Female, age 91, both hemispheres 86.4
2486 Female, age 94, both hemispheres 57.8
2201 Male, age 74, unknown 20.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 143.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 143.8
Samples: 152

Max nTPM: 413.5
Min nTPM: 3.5
Std nTPM: 60.7
Median nTPM: 142.6
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 413.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 360.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 305.3
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 287.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 261.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 241.4
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 241.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 236.0
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 234.5
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 228.6
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 226.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 179.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 179.6
FF:10151-102I7 76 years, female 179.6

AMYGDALA - Pig RNA-seqi
Average nTPM 79.9
Pig sample Sample description nTPM
Amygdala
nTPM: 80.0
Samples: 4

Max nTPM: 122.0
Min nTPM: 54.4
Sample A Female 122.0
Sample B Female 54.4
Sample C Male 73.2
Sample D Male 70.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 265.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 265.3
Samples: 4

Max nTPM: 292.9
Min nTPM: 247.9
Sample A Male 270.5
Sample B Male 250.0
Sample C Female 292.9
Sample D Female 247.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 24.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 24.2
68196909 Antisense, RP_041116_01_D02, Mouse strain C57BL/6J (56 days, male) 24.2

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.