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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:128.8 nTPM
HPA:128.8 nTPM
GTEx:129.2 nTPM
FANTOM5:181.6 Scaled Tags Per Million
Pig:2.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035304Antibody CAB000020
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 128.8
Sample id Sample description nTPM
Hippocampus
nTPM: 128.8
1898 Male, age 80, left hemisphere 146.7
1855 Male, age 76, left hemisphere 138.8
2529 Female, age 94, left hemisphere 125.0
2148 Female, age 91, left hemisphere 124.9
1911 Female, age 85, right hemisphere 121.1
2621 Female, age 67, right hemisphere 116.3
Dentate gyrus
nTPM: 120.1
2010 Male, age 76, both hemispheres 138.9
2528 Male, age 74, both hemispheres 131.5
2530 Female, age 94, left hemisphere 122.6
2246 Female, age 85, both hemispheres 117.8
1927 Female, age 91, both hemispheres 106.4
2531 Female, age 67, both hemispheres 103.6
Entorhinal gyrus
nTPM: 103.9
2117 Female, age 91, right hemisphere 130.1
1787 Male, age 76, left hemisphere 104.8
2686 Male, age 75, right hemisphere 102.1
2764 Male, age 80, right hemisphere 99.4
1938 Female, age 85, left hemisphere 97.2
2613 Female, age 94, left hemisphere 89.9
Hippocampus, CA1
nTPM: 121.9
2082 Female, age 91, right hemisphere 132.2
1873 Female, age 85, both hemispheres 130.8
2045 Male, age 76, both hemispheres 129.9
2527 Male, age 74, both hemispheres 116.0
2749 Male, age 80, left hemisphere 100.8
Hippocampus, CA2
nTPM: 121.3
2249 Male, age 74, both hemispheres 141.8
1940 Female, age 85, left hemisphere 130.5
2113 Female, age 91, right hemisphere 121.8
2437 Female, age 94, left hemisphere 116.0
1963 Male, age 80, left hemisphere 112.5
1892 Male, age 76, both hemispheres 105.3
Hippocampus, CA3
nTPM: 109.8
2436 Male, age 74, both hemispheres 117.7
1891 Female, age 85, both hemispheres 115.2
1867 Male, age 76, both hemispheres 110.6
2620 Female, age 94, left hemisphere 107.6
2861 Female, age 67, both hemispheres 105.1
2137 Male, age 80, left hemisphere 102.8
Parahippocampal cortex
nTPM: 103.4
2018 Male, age 76, both hemispheres 123.2
2250 Female, age 67, right hemisphere 109.6
2692 Male, age 74, both hemispheres 108.4
2245 Female, age 91, both hemispheres 105.1
1990 Female, age 91, right hemisphere 102.7
1850 Male, age 80, both hemispheres 101.3
2622 Female, age 67, right hemisphere 98.3
1933 Female, age 85, both hemispheres 96.6
2693 Female, age 94, both hemispheres 95.0
2532 Female, age 72, left hemisphere 94.0
Perirhinal gyrus
nTPM: 98.3
2521 Female, age 94, right hemisphere 104.1
1794 Male, age 80, right hemisphere 100.4
1847 Female, age 91, left hemisphere 97.5
1841 Female, age 85, right hemisphere 95.0
2848 Male, age 76, right hemisphere 94.5
Subiculum
nTPM: 117.1
2042 Male, age 76, both hemispheres 136.6
2729 Female, age 91, right hemisphere 128.1
2619 Male, age 74, both hemispheres 115.6
1901 Male, age 80, both hemispheres 114.5
2438 Female, age 94, left hemisphere 108.5
1977 Female, age 85, both hemispheres 99.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 129.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 129.2
Samples: 197

Max nTPM: 533.2
Min nTPM: 28.3
Std nTPM: 64.4
Median nTPM: 117.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 533.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 421.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 280.6
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 259.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 258.5
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 253.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 245.2
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 244.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 241.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 241.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 238.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 181.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 181.6
FF:10153-102I9 76 years, female 224.1
FF:10169-103B7 60 years, female 139.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.0
Samples: 4

Max nTPM: 2.5
Min nTPM: 1.7
Sample A Female 1.9
Sample B Female 1.7
Sample C Male 2.5
Sample D Male 1.9
Entorhinal cortex
nTPM: 1.7
Samples: 4

Max nTPM: 2.2
Min nTPM: 0.9
Sample A Female 1.9
Sample B Female 0.9
Sample C Male 2.2
Sample D Male 1.7
Subiculum
nTPM: 2.0
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.8
Sample A Female 2.0
Sample B Female 2.2
Sample C Male 1.8
Sample D Male 2.1
Ventral hippocampus
nTPM: 1.8
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.2
Sample A Female 2.1
Sample B Female 1.9
Sample C Male 2.1
Sample D Male 1.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.