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SPAG9
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:44.2 nTPM
HPA:44.2 nTPM
GTEx:47.3 nTPM
FANTOM5:197.6 Scaled Tags Per Million
Pig:72.2 nTPM
Mouse:134.9 nTPM
Allen mouse:18.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040446
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.2
Sample id Sample description nTPM
Hippocampus
nTPM: 38.6
2529 Female, age 94, left hemisphere 47.7
1911 Female, age 85, right hemisphere 39.3
1898 Male, age 80, left hemisphere 39.1
2621 Female, age 67, right hemisphere 38.7
2148 Female, age 91, left hemisphere 35.6
1855 Male, age 76, left hemisphere 31.0
Dentate gyrus
nTPM: 38.7
2530 Female, age 94, left hemisphere 44.2
2528 Male, age 74, both hemispheres 43.5
2010 Male, age 76, both hemispheres 40.1
2246 Female, age 85, both hemispheres 35.5
1927 Female, age 91, both hemispheres 34.9
2531 Female, age 67, both hemispheres 33.9
Entorhinal gyrus
nTPM: 44.2
2686 Male, age 75, right hemisphere 50.3
2117 Female, age 91, right hemisphere 48.7
2764 Male, age 80, right hemisphere 44.9
1938 Female, age 85, left hemisphere 42.4
1787 Male, age 76, left hemisphere 42.0
2613 Female, age 94, left hemisphere 37.0
Hippocampus, CA1
nTPM: 35.6
2527 Male, age 74, both hemispheres 41.4
2749 Male, age 80, left hemisphere 38.8
1873 Female, age 85, both hemispheres 36.6
2082 Female, age 91, right hemisphere 33.1
2045 Male, age 76, both hemispheres 28.4
Hippocampus, CA2
nTPM: 41.2
1963 Male, age 80, left hemisphere 45.9
2437 Female, age 94, left hemisphere 45.2
2249 Male, age 74, both hemispheres 40.8
1892 Male, age 76, both hemispheres 39.0
1940 Female, age 85, left hemisphere 38.3
2113 Female, age 91, right hemisphere 37.8
Hippocampus, CA3
nTPM: 35.6
1891 Female, age 85, both hemispheres 45.8
1867 Male, age 76, both hemispheres 37.6
2861 Female, age 67, both hemispheres 35.2
2137 Male, age 80, left hemisphere 32.3
2436 Male, age 74, both hemispheres 32.1
2620 Female, age 94, left hemisphere 30.3
Parahippocampal cortex
nTPM: 39.4
2692 Male, age 74, both hemispheres 46.7
1850 Male, age 80, both hemispheres 43.4
1990 Female, age 91, right hemisphere 41.3
1933 Female, age 85, both hemispheres 41.1
2018 Male, age 76, both hemispheres 40.7
2245 Female, age 91, both hemispheres 37.8
2622 Female, age 67, right hemisphere 37.1
2532 Female, age 72, left hemisphere 36.8
2693 Female, age 94, both hemispheres 35.8
2250 Female, age 67, right hemisphere 33.2
Perirhinal gyrus
nTPM: 40.1
1794 Male, age 80, right hemisphere 42.8
1841 Female, age 85, right hemisphere 41.0
2848 Male, age 76, right hemisphere 40.0
1847 Female, age 91, left hemisphere 39.8
2521 Female, age 94, right hemisphere 37.0
Subiculum
nTPM: 42.8
2619 Male, age 74, both hemispheres 47.1
1901 Male, age 80, both hemispheres 46.7
2042 Male, age 76, both hemispheres 43.5
1977 Female, age 85, both hemispheres 43.3
2438 Female, age 94, left hemisphere 41.0
2729 Female, age 91, right hemisphere 35.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.3
Samples: 197

Max nTPM: 133.3
Min nTPM: 22.3
Std nTPM: 16.0
Median nTPM: 45.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 133.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 94.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 92.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 87.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 87.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 81.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 80.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 77.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 72.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 72.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 71.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 197.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 197.6
FF:10153-102I9 76 years, female 238.3
FF:10169-103B7 60 years, female 156.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 64.9
Samples: 4

Max nTPM: 73.4
Min nTPM: 53.3
Sample A Female 71.0
Sample B Female 61.9
Sample C Male 73.4
Sample D Male 53.3
Entorhinal cortex
nTPM: 72.2
Samples: 4

Max nTPM: 75.8
Min nTPM: 68.6
Sample A Female 72.6
Sample B Female 75.8
Sample C Male 71.9
Sample D Male 68.6
Subiculum
nTPM: 69.5
Samples: 4

Max nTPM: 81.0
Min nTPM: 63.5
Sample A Female 81.0
Sample B Female 66.5
Sample C Male 63.5
Sample D Male 67.1
Ventral hippocampus
nTPM: 60.5
Samples: 4

Max nTPM: 66.8
Min nTPM: 51.8
Sample A Female 66.1
Sample B Female 57.4
Sample C Male 51.8
Sample D Male 66.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 134.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 135.0
Samples: 4

Max nTPM: 143.9
Min nTPM: 126.9
Sample A Male 141.3
Sample B Male 143.9
Sample C Female 126.9
Sample D Female 127.7
Hippocampal formation
nTPM: 106.4
Samples: 4

Max nTPM: 112.4
Min nTPM: 100.7
Sample A Male 112.4
Sample B Male 109.6
Sample C Female 100.7
Sample D Female 102.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.3
70302246 Antisense, RP_050607_03_H09, Mouse strain C57BL/6J (56 days, male) 18.3

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