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SS18L2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:28.2 nTPM
HPA:28.2 nTPM
GTEx:37.2 nTPM
FANTOM5:26.4 Scaled Tags Per Million
Pig:37.0 nTPM
Mouse:73.3 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047377
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.2
1898 Male, age 80, left hemisphere 28.9
1911 Female, age 85, right hemisphere 27.5
1855 Male, age 76, left hemisphere 27.0
2529 Female, age 94, left hemisphere 26.9
2621 Female, age 67, right hemisphere 26.6
2148 Female, age 91, left hemisphere 26.2
Dentate gyrus
nTPM: 27.7
2010 Male, age 76, both hemispheres 28.7
2528 Male, age 74, both hemispheres 28.0
1927 Female, age 91, both hemispheres 27.7
2246 Female, age 85, both hemispheres 27.6
2531 Female, age 67, both hemispheres 27.2
2530 Female, age 94, left hemisphere 27.1
Entorhinal gyrus
nTPM: 26.9
1938 Female, age 85, left hemisphere 28.0
1787 Male, age 76, left hemisphere 27.6
2764 Male, age 80, right hemisphere 27.3
2117 Female, age 91, right hemisphere 27.1
2686 Male, age 75, right hemisphere 26.0
2613 Female, age 94, left hemisphere 25.8
Hippocampus, CA1
nTPM: 28.1
2749 Male, age 80, left hemisphere 29.8
2045 Male, age 76, both hemispheres 29.2
1873 Female, age 85, both hemispheres 27.6
2527 Male, age 74, both hemispheres 27.1
2082 Female, age 91, right hemisphere 26.9
Hippocampus, CA2
nTPM: 27.7
1892 Male, age 76, both hemispheres 29.6
1963 Male, age 80, left hemisphere 28.4
2249 Male, age 74, both hemispheres 27.6
2437 Female, age 94, left hemisphere 27.1
2113 Female, age 91, right hemisphere 26.8
1940 Female, age 85, left hemisphere 26.5
Hippocampus, CA3
nTPM: 28.2
1867 Male, age 76, both hemispheres 31.2
2137 Male, age 80, left hemisphere 29.3
2620 Female, age 94, left hemisphere 28.0
2436 Male, age 74, both hemispheres 27.6
1891 Female, age 85, both hemispheres 27.5
2861 Female, age 67, both hemispheres 25.8
Parahippocampal cortex
nTPM: 27.2
1850 Male, age 80, both hemispheres 28.3
2018 Male, age 76, both hemispheres 27.7
2693 Female, age 94, both hemispheres 27.5
1933 Female, age 85, both hemispheres 27.4
2250 Female, age 67, right hemisphere 27.1
2692 Male, age 74, both hemispheres 27.1
1990 Female, age 91, right hemisphere 27.0
2532 Female, age 72, left hemisphere 27.0
2245 Female, age 91, both hemispheres 26.6
2622 Female, age 67, right hemisphere 25.9
Perirhinal gyrus
nTPM: 27.9
1841 Female, age 85, right hemisphere 28.3
1794 Male, age 80, right hemisphere 28.0
1847 Female, age 91, left hemisphere 27.9
2848 Male, age 76, right hemisphere 27.7
2521 Female, age 94, right hemisphere 27.3
Subiculum
nTPM: 27.2
1977 Female, age 85, both hemispheres 28.3
1901 Male, age 80, both hemispheres 27.7
2042 Male, age 76, both hemispheres 27.7
2729 Female, age 91, right hemisphere 27.0
2619 Male, age 74, both hemispheres 26.4
2438 Female, age 94, left hemisphere 26.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.2
Samples: 197

Max nTPM: 91.2
Min nTPM: 21.5
Std nTPM: 9.8
Median nTPM: 36.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 91.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 77.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 73.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 64.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 61.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 58.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 54.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 53.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 52.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 52.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 52.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.4
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 19.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.0
Samples: 4

Max nTPM: 47.5
Min nTPM: 29.5
Sample A Female 47.5
Sample B Female 34.2
Sample C Male 36.9
Sample D Male 29.5
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 45.5
Min nTPM: 26.9
Sample A Female 37.2
Sample B Female 45.5
Sample C Male 38.5
Sample D Male 26.9
Subiculum
nTPM: 33.8
Samples: 4

Max nTPM: 45.5
Min nTPM: 25.3
Sample A Female 45.5
Sample B Female 32.7
Sample C Male 25.3
Sample D Male 31.8
Ventral hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 34.5
Min nTPM: 27.4
Sample A Female 34.5
Sample B Female 27.4
Sample C Male 32.9
Sample D Male 32.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.0
Samples: 4

Max nTPM: 73.9
Min nTPM: 55.8
Sample A Male 73.0
Sample B Male 73.9
Sample C Female 73.2
Sample D Female 55.8
Hippocampal formation
nTPM: 73.3
Samples: 4

Max nTPM: 93.0
Min nTPM: 63.3
Sample A Male 93.0
Sample B Male 63.3
Sample C Female 69.6
Sample D Female 67.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
68545450 Antisense, RP_050120_01_A03, Mouse strain C57BL/6J (56 days, male) 2.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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