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HHATL
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:76.0 nTPM
HPA:76.0 nTPM
GTEx:58.9 nTPM
FANTOM5:89.9 Scaled Tags Per Million
Pig:1.5 nTPM
Mouse:9.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018174
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.0
Sample id Sample description nTPM
Hippocampus
nTPM: 64.4
1911 Female, age 85, right hemisphere 77.8
2621 Female, age 67, right hemisphere 63.9
1855 Male, age 76, left hemisphere 62.4
2529 Female, age 94, left hemisphere 62.3
2148 Female, age 91, left hemisphere 60.4
1898 Male, age 80, left hemisphere 59.7
Dentate gyrus
nTPM: 67.8
2530 Female, age 94, left hemisphere 87.0
2528 Male, age 74, both hemispheres 80.4
2246 Female, age 85, both hemispheres 73.5
2010 Male, age 76, both hemispheres 65.4
2531 Female, age 67, both hemispheres 51.4
1927 Female, age 91, both hemispheres 49.4
Entorhinal gyrus
nTPM: 63.5
2117 Female, age 91, right hemisphere 77.0
2764 Male, age 80, right hemisphere 76.1
1787 Male, age 76, left hemisphere 68.4
1938 Female, age 85, left hemisphere 60.1
2613 Female, age 94, left hemisphere 52.8
2686 Male, age 75, right hemisphere 46.7
Hippocampus, CA1
nTPM: 62.1
2527 Male, age 74, both hemispheres 77.3
1873 Female, age 85, both hemispheres 74.6
2082 Female, age 91, right hemisphere 59.7
2749 Male, age 80, left hemisphere 53.1
2045 Male, age 76, both hemispheres 45.8
Hippocampus, CA2
nTPM: 64.8
1940 Female, age 85, left hemisphere 81.2
2249 Male, age 74, both hemispheres 74.7
1963 Male, age 80, left hemisphere 68.9
2113 Female, age 91, right hemisphere 59.0
2437 Female, age 94, left hemisphere 57.8
1892 Male, age 76, both hemispheres 47.2
Hippocampus, CA3
nTPM: 57.3
1891 Female, age 85, both hemispheres 80.5
2436 Male, age 74, both hemispheres 60.1
1867 Male, age 76, both hemispheres 54.0
2620 Female, age 94, left hemisphere 53.9
2861 Female, age 67, both hemispheres 50.1
2137 Male, age 80, left hemisphere 44.9
Parahippocampal cortex
nTPM: 58.9
2692 Male, age 74, both hemispheres 71.1
2532 Female, age 72, left hemisphere 66.7
2018 Male, age 76, both hemispheres 65.3
1933 Female, age 85, both hemispheres 60.8
1990 Female, age 91, right hemisphere 59.4
1850 Male, age 80, both hemispheres 55.2
2250 Female, age 67, right hemisphere 55.0
2622 Female, age 67, right hemisphere 52.2
2245 Female, age 91, both hemispheres 52.0
2693 Female, age 94, both hemispheres 51.5
Perirhinal gyrus
nTPM: 50.6
2848 Male, age 76, right hemisphere 57.3
1794 Male, age 80, right hemisphere 52.5
1841 Female, age 85, right hemisphere 51.0
2521 Female, age 94, right hemisphere 48.3
1847 Female, age 91, left hemisphere 44.1
Subiculum
nTPM: 76.0
2042 Male, age 76, both hemispheres 100.1
1901 Male, age 80, both hemispheres 81.7
2619 Male, age 74, both hemispheres 77.7
2729 Female, age 91, right hemisphere 71.5
1977 Female, age 85, both hemispheres 69.8
2438 Female, age 94, left hemisphere 55.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.9
Samples: 197

Max nTPM: 188.8
Min nTPM: 6.5
Std nTPM: 32.1
Median nTPM: 51.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 188.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 161.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 159.2
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 154.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 146.0
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 142.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 133.2
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 126.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 119.9
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 119.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 119.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.9
FF:10153-102I9 76 years, female 111.8
FF:10169-103B7 60 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.5
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.1
Sample A Female 1.1
Sample B Female 1.5
Sample C Male 1.9
Sample D Male 1.6
Entorhinal cortex
nTPM: 1.4
Samples: 4

Max nTPM: 1.4
Min nTPM: 1.2
Sample A Female 1.4
Sample B Female 1.4
Sample C Male 1.2
Sample D Male 1.4
Subiculum
nTPM: 1.4
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 1.5
Sample C Male 1.5
Sample D Male 1.6
Ventral hippocampus
nTPM: 1.5
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.2
Sample A Female 1.2
Sample B Female 1.4
Sample C Male 1.6
Sample D Male 1.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 8.8
Min nTPM: 5.0
Sample A Male 8.8
Sample B Male 8.2
Sample C Female 6.0
Sample D Female 5.0
Hippocampal formation
nTPM: 9.1
Samples: 4

Max nTPM: 11.2
Min nTPM: 7.5
Sample A Male 7.5
Sample B Male 8.6
Sample C Female 11.2
Sample D Female 9.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
80514103 Antisense, RP_080505_03_H04, Mouse strain C57BL/6J (56 days, male) 0.0

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