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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:53.1 nTPM
HPA:53.1 nTPM
GTEx:89.2 nTPM
FANTOM5:46.3 Scaled Tags Per Million
Pig:0.9 nTPM
Mouse:3.2 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030651
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.1
Sample id Sample description nTPM
Hippocampus
nTPM: 43.5
2529 Female, age 94, left hemisphere 55.5
1911 Female, age 85, right hemisphere 55.1
1898 Male, age 80, left hemisphere 45.2
2148 Female, age 91, left hemisphere 37.0
2621 Female, age 67, right hemisphere 35.1
1855 Male, age 76, left hemisphere 33.2
Dentate gyrus
nTPM: 45.9
2530 Female, age 94, left hemisphere 68.6
2528 Male, age 74, both hemispheres 59.4
2010 Male, age 76, both hemispheres 50.0
2531 Female, age 67, both hemispheres 34.6
2246 Female, age 85, both hemispheres 32.4
1927 Female, age 91, both hemispheres 30.6
Entorhinal gyrus
nTPM: 41.8
2117 Female, age 91, right hemisphere 72.3
2764 Male, age 80, right hemisphere 57.4
1938 Female, age 85, left hemisphere 32.2
2686 Male, age 75, right hemisphere 31.0
2613 Female, age 94, left hemisphere 29.5
1787 Male, age 76, left hemisphere 28.6
Hippocampus, CA1
nTPM: 34.1
1873 Female, age 85, both hemispheres 45.3
2527 Male, age 74, both hemispheres 40.4
2082 Female, age 91, right hemisphere 37.1
2749 Male, age 80, left hemisphere 29.4
2045 Male, age 76, both hemispheres 18.5
Hippocampus, CA2
nTPM: 42.4
1963 Male, age 80, left hemisphere 63.9
2249 Male, age 74, both hemispheres 48.8
2437 Female, age 94, left hemisphere 41.3
1940 Female, age 85, left hemisphere 39.1
2113 Female, age 91, right hemisphere 38.6
1892 Male, age 76, both hemispheres 22.8
Hippocampus, CA3
nTPM: 34.7
1891 Female, age 85, both hemispheres 51.9
2620 Female, age 94, left hemisphere 41.4
2436 Male, age 74, both hemispheres 31.9
1867 Male, age 76, both hemispheres 30.4
2861 Female, age 67, both hemispheres 30.1
2137 Male, age 80, left hemisphere 22.8
Parahippocampal cortex
nTPM: 29.8
2692 Male, age 74, both hemispheres 44.0
1990 Female, age 91, right hemisphere 39.6
2532 Female, age 72, left hemisphere 36.9
2018 Male, age 76, both hemispheres 29.9
2245 Female, age 91, both hemispheres 29.6
1933 Female, age 85, both hemispheres 29.4
1850 Male, age 80, both hemispheres 28.7
2693 Female, age 94, both hemispheres 22.2
2250 Female, age 67, right hemisphere 19.8
2622 Female, age 67, right hemisphere 18.0
Perirhinal gyrus
nTPM: 21.1
1794 Male, age 80, right hemisphere 25.2
2521 Female, age 94, right hemisphere 23.8
2848 Male, age 76, right hemisphere 20.0
1841 Female, age 85, right hemisphere 18.8
1847 Female, age 91, left hemisphere 17.9
Subiculum
nTPM: 53.1
2042 Male, age 76, both hemispheres 76.5
1901 Male, age 80, both hemispheres 66.7
1977 Female, age 85, both hemispheres 49.6
2619 Male, age 74, both hemispheres 46.7
2729 Female, age 91, right hemisphere 45.4
2438 Female, age 94, left hemisphere 33.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.2
Samples: 197

Max nTPM: 269.1
Min nTPM: 17.2
Std nTPM: 49.1
Median nTPM: 79.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 269.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 263.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 224.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 222.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 217.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 213.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 197.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 196.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 190.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 187.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 187.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.3
FF:10153-102I9 76 years, female 51.9
FF:10169-103B7 60 years, female 40.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.5
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.3
Sample A Female 0.6
Sample B Female 0.3
Sample C Male 0.8
Sample D Male 0.3
Entorhinal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.2
Sample A Female 1.4
Sample B Female 0.7
Sample C Male 0.5
Sample D Male 0.2
Subiculum
nTPM: 0.9
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.2
Sample A Female 0.8
Sample B Female 0.2
Sample C Male 0.9
Sample D Male 1.6
Ventral hippocampus
nTPM: 0.6
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.3
Sample A Female 0.5
Sample B Female 0.3
Sample C Male 0.9
Sample D Male 0.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.0
Samples: 4

Max nTPM: 2.5
Min nTPM: 1.4
Sample A Male 2.0
Sample B Male 2.0
Sample C Female 1.4
Sample D Female 2.5
Hippocampal formation
nTPM: 3.3
Samples: 4

Max nTPM: 6.3
Min nTPM: 0.7
Sample A Male 0.7
Sample B Male 2.2
Sample C Female 3.8
Sample D Female 6.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
79544848 Antisense, RP_071101_01_A09, Mouse strain C57BL/6J (56 days, male) 0.4

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