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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:40.7 nTPM
HPA:40.7 nTPM
GTEx:36.4 nTPM
FANTOM5:115.5 Scaled Tags Per Million
Pig:70.9 nTPM
Mouse:83.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035116Antibody CAB010207
Glial cells HighNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.7
Sample id Sample description nTPM
Hippocampus
nTPM: 31.2
1898 Male, age 80, left hemisphere 35.4
2529 Female, age 94, left hemisphere 33.9
2621 Female, age 67, right hemisphere 33.0
1911 Female, age 85, right hemisphere 30.6
1855 Male, age 76, left hemisphere 29.9
2148 Female, age 91, left hemisphere 24.6
Dentate gyrus
nTPM: 30.2
2010 Male, age 76, both hemispheres 44.9
1927 Female, age 91, both hemispheres 40.8
2246 Female, age 85, both hemispheres 26.2
2528 Male, age 74, both hemispheres 24.9
2531 Female, age 67, both hemispheres 22.9
2530 Female, age 94, left hemisphere 21.4
Entorhinal gyrus
nTPM: 32.7
1938 Female, age 85, left hemisphere 39.7
1787 Male, age 76, left hemisphere 35.6
2764 Male, age 80, right hemisphere 34.9
2686 Male, age 75, right hemisphere 32.5
2117 Female, age 91, right hemisphere 27.1
2613 Female, age 94, left hemisphere 26.6
Hippocampus, CA1
nTPM: 39.5
2749 Male, age 80, left hemisphere 66.3
2045 Male, age 76, both hemispheres 43.8
1873 Female, age 85, both hemispheres 32.9
2527 Male, age 74, both hemispheres 28.8
2082 Female, age 91, right hemisphere 25.6
Hippocampus, CA2
nTPM: 31.8
1892 Male, age 76, both hemispheres 40.1
1963 Male, age 80, left hemisphere 37.8
2249 Male, age 74, both hemispheres 31.0
1940 Female, age 85, left hemisphere 29.4
2113 Female, age 91, right hemisphere 27.3
2437 Female, age 94, left hemisphere 24.9
Hippocampus, CA3
nTPM: 36.5
2137 Male, age 80, left hemisphere 52.2
1867 Male, age 76, both hemispheres 44.6
2436 Male, age 74, both hemispheres 41.9
2620 Female, age 94, left hemisphere 28.4
1891 Female, age 85, both hemispheres 28.0
2861 Female, age 67, both hemispheres 23.8
Parahippocampal cortex
nTPM: 34.8
1850 Male, age 80, both hemispheres 44.1
1933 Female, age 85, both hemispheres 39.8
2018 Male, age 76, both hemispheres 39.1
2693 Female, age 94, both hemispheres 37.1
1990 Female, age 91, right hemisphere 36.3
2250 Female, age 67, right hemisphere 32.0
2245 Female, age 91, both hemispheres 31.4
2532 Female, age 72, left hemisphere 30.6
2622 Female, age 67, right hemisphere 30.0
2692 Male, age 74, both hemispheres 27.9
Perirhinal gyrus
nTPM: 40.7
1847 Female, age 91, left hemisphere 48.8
2848 Male, age 76, right hemisphere 42.0
1841 Female, age 85, right hemisphere 39.7
1794 Male, age 80, right hemisphere 37.2
2521 Female, age 94, right hemisphere 35.8
Subiculum
nTPM: 34.1
2042 Male, age 76, both hemispheres 46.6
1901 Male, age 80, both hemispheres 42.1
1977 Female, age 85, both hemispheres 32.5
2438 Female, age 94, left hemisphere 31.3
2619 Male, age 74, both hemispheres 27.6
2729 Female, age 91, right hemisphere 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.4
Samples: 197

Max nTPM: 59.9
Min nTPM: 19.6
Std nTPM: 7.5
Median nTPM: 35.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 59.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 58.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 58.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 56.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 55.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 53.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 53.3
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 52.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 52.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 51.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 50.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.5
FF:10169-103B7 60 years, female 122.4
FF:10153-102I9 76 years, female 108.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 70.9
Samples: 4

Max nTPM: 83.2
Min nTPM: 60.2
Sample A Female 83.2
Sample B Female 73.7
Sample C Male 60.2
Sample D Male 66.5
Entorhinal cortex
nTPM: 63.8
Samples: 4

Max nTPM: 69.1
Min nTPM: 53.0
Sample A Female 69.1
Sample B Female 68.5
Sample C Male 64.6
Sample D Male 53.0
Subiculum
nTPM: 62.8
Samples: 4

Max nTPM: 76.9
Min nTPM: 57.5
Sample A Female 76.9
Sample B Female 58.3
Sample C Male 57.5
Sample D Male 58.3
Ventral hippocampus
nTPM: 63.5
Samples: 4

Max nTPM: 69.8
Min nTPM: 54.9
Sample A Female 69.8
Sample B Female 54.9
Sample C Male 60.4
Sample D Male 68.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 83.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.4
Samples: 4

Max nTPM: 71.8
Min nTPM: 65.7
Sample A Male 65.7
Sample B Male 70.6
Sample C Female 71.8
Sample D Female 69.5
Hippocampal formation
nTPM: 83.1
Samples: 4

Max nTPM: 86.5
Min nTPM: 81.0
Sample A Male 82.5
Sample B Male 82.2
Sample C Female 86.5
Sample D Female 81.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71495825 Antisense, RP_050913_03_F07, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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