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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:26.6 nTPM
HPA:26.6 nTPM
GTEx:20.1 nTPM
FANTOM5:77.1 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:70.9 nTPM
Allen mouse:30.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035860Antibody CAB017498
Glial cells MediumLow
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.6
Sample id Sample description nTPM
Hippocampus
nTPM: 22.8
1898 Male, age 80, left hemisphere 24.9
2621 Female, age 67, right hemisphere 23.5
2529 Female, age 94, left hemisphere 23.1
1855 Male, age 76, left hemisphere 22.5
2148 Female, age 91, left hemisphere 21.5
1911 Female, age 85, right hemisphere 21.1
Dentate gyrus
nTPM: 23.4
1927 Female, age 91, both hemispheres 26.6
2530 Female, age 94, left hemisphere 26.0
2010 Male, age 76, both hemispheres 23.3
2531 Female, age 67, both hemispheres 21.8
2528 Male, age 74, both hemispheres 21.7
2246 Female, age 85, both hemispheres 21.0
Entorhinal gyrus
nTPM: 24.7
2764 Male, age 80, right hemisphere 26.7
2613 Female, age 94, left hemisphere 25.9
1938 Female, age 85, left hemisphere 25.4
1787 Male, age 76, left hemisphere 25.3
2117 Female, age 91, right hemisphere 23.4
2686 Male, age 75, right hemisphere 21.6
Hippocampus, CA1
nTPM: 24.3
2749 Male, age 80, left hemisphere 31.3
2045 Male, age 76, both hemispheres 23.6
2527 Male, age 74, both hemispheres 23.1
1873 Female, age 85, both hemispheres 22.6
2082 Female, age 91, right hemisphere 20.8
Hippocampus, CA2
nTPM: 24.7
2437 Female, age 94, left hemisphere 27.8
1963 Male, age 80, left hemisphere 26.7
1892 Male, age 76, both hemispheres 24.7
1940 Female, age 85, left hemisphere 23.2
2249 Male, age 74, both hemispheres 23.0
2113 Female, age 91, right hemisphere 22.5
Hippocampus, CA3
nTPM: 25.2
2436 Male, age 74, both hemispheres 29.8
2137 Male, age 80, left hemisphere 26.5
1867 Male, age 76, both hemispheres 26.3
2620 Female, age 94, left hemisphere 24.9
1891 Female, age 85, both hemispheres 22.2
2861 Female, age 67, both hemispheres 21.3
Parahippocampal cortex
nTPM: 24.2
1850 Male, age 80, both hemispheres 28.3
2018 Male, age 76, both hemispheres 25.1
1990 Female, age 91, right hemisphere 24.9
1933 Female, age 85, both hemispheres 24.3
2245 Female, age 91, both hemispheres 24.0
2532 Female, age 72, left hemisphere 23.5
2693 Female, age 94, both hemispheres 23.3
2692 Male, age 74, both hemispheres 23.2
2250 Female, age 67, right hemisphere 23.0
2622 Female, age 67, right hemisphere 22.3
Perirhinal gyrus
nTPM: 26.6
1794 Male, age 80, right hemisphere 29.7
1847 Female, age 91, left hemisphere 29.5
1841 Female, age 85, right hemisphere 25.1
2521 Female, age 94, right hemisphere 24.8
2848 Male, age 76, right hemisphere 23.7
Subiculum
nTPM: 25.5
2438 Female, age 94, left hemisphere 33.3
1901 Male, age 80, both hemispheres 26.2
2042 Male, age 76, both hemispheres 25.0
1977 Female, age 85, both hemispheres 23.6
2619 Male, age 74, both hemispheres 22.8
2729 Female, age 91, right hemisphere 22.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.1
Samples: 197

Max nTPM: 41.9
Min nTPM: 9.9
Std nTPM: 5.6
Median nTPM: 18.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 41.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 38.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 36.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 34.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 33.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 32.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 31.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 30.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 30.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 30.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 29.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.1
FF:10169-103B7 60 years, female 102.5
FF:10153-102I9 76 years, female 51.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 28.7
Min nTPM: 20.0
Sample A Female 28.7
Sample B Female 23.4
Sample C Male 20.4
Sample D Male 20.0
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 22.1
Min nTPM: 17.2
Sample A Female 22.1
Sample B Female 20.5
Sample C Male 17.8
Sample D Male 17.2
Subiculum
nTPM: 19.6
Samples: 4

Max nTPM: 25.9
Min nTPM: 16.7
Sample A Female 25.9
Sample B Female 16.7
Sample C Male 18.8
Sample D Male 17.1
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 26.4
Min nTPM: 15.0
Sample A Female 23.2
Sample B Female 15.0
Sample C Male 26.4
Sample D Male 20.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.5
Samples: 4

Max nTPM: 56.4
Min nTPM: 50.6
Sample A Male 50.9
Sample B Male 56.0
Sample C Female 56.4
Sample D Female 50.6
Hippocampal formation
nTPM: 70.9
Samples: 4

Max nTPM: 80.0
Min nTPM: 60.6
Sample A Male 60.6
Sample B Male 63.1
Sample C Female 80.0
Sample D Female 79.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 30.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 30.9
199198 Antisense, RP_040604_02_C11, Mouse strain C57BL/6J (56 days, male) 30.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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