ABOUTMENU
HELP
NEWS
CCDC28A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:43.8 nTPM
HPA:43.8 nTPM
GTEx:44.8 nTPM
FANTOM5:68.4 Scaled Tags Per Million
Pig:19.5 nTPM
Mouse:29.1 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055125
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.8
Sample id Sample description nTPM
Hippocampus
nTPM: 41.2
1898 Male, age 80, left hemisphere 44.5
2148 Female, age 91, left hemisphere 43.6
1855 Male, age 76, left hemisphere 43.2
1911 Female, age 85, right hemisphere 40.2
2621 Female, age 67, right hemisphere 39.7
2529 Female, age 94, left hemisphere 36.1
Dentate gyrus
nTPM: 42.4
1927 Female, age 91, both hemispheres 48.7
2010 Male, age 76, both hemispheres 45.1
2531 Female, age 67, both hemispheres 42.9
2246 Female, age 85, both hemispheres 40.5
2528 Male, age 74, both hemispheres 39.6
2530 Female, age 94, left hemisphere 37.7
Entorhinal gyrus
nTPM: 39.2
2764 Male, age 80, right hemisphere 40.6
2613 Female, age 94, left hemisphere 40.1
1938 Female, age 85, left hemisphere 39.7
1787 Male, age 76, left hemisphere 39.2
2117 Female, age 91, right hemisphere 38.3
2686 Male, age 75, right hemisphere 37.5
Hippocampus, CA1
nTPM: 43.8
2749 Male, age 80, left hemisphere 47.0
2045 Male, age 76, both hemispheres 45.9
1873 Female, age 85, both hemispheres 45.8
2527 Male, age 74, both hemispheres 40.4
2082 Female, age 91, right hemisphere 39.9
Hippocampus, CA2
nTPM: 41.4
1892 Male, age 76, both hemispheres 48.5
1963 Male, age 80, left hemisphere 44.7
2249 Male, age 74, both hemispheres 40.8
2113 Female, age 91, right hemisphere 39.2
1940 Female, age 85, left hemisphere 38.5
2437 Female, age 94, left hemisphere 36.5
Hippocampus, CA3
nTPM: 42.3
2137 Male, age 80, left hemisphere 44.6
2436 Male, age 74, both hemispheres 44.3
2620 Female, age 94, left hemisphere 42.5
1867 Male, age 76, both hemispheres 41.7
1891 Female, age 85, both hemispheres 40.8
2861 Female, age 67, both hemispheres 39.7
Parahippocampal cortex
nTPM: 39.1
1850 Male, age 80, both hemispheres 42.3
2693 Female, age 94, both hemispheres 41.4
2245 Female, age 91, both hemispheres 40.6
1990 Female, age 91, right hemisphere 40.3
1933 Female, age 85, both hemispheres 39.7
2018 Male, age 76, both hemispheres 38.7
2250 Female, age 67, right hemisphere 38.0
2532 Female, age 72, left hemisphere 37.4
2692 Male, age 74, both hemispheres 36.5
2622 Female, age 67, right hemisphere 36.1
Perirhinal gyrus
nTPM: 41.9
1847 Female, age 91, left hemisphere 44.8
1841 Female, age 85, right hemisphere 41.9
2848 Male, age 76, right hemisphere 41.5
1794 Male, age 80, right hemisphere 41.4
2521 Female, age 94, right hemisphere 39.9
Subiculum
nTPM: 38.5
2729 Female, age 91, right hemisphere 40.1
1901 Male, age 80, both hemispheres 40.0
1977 Female, age 85, both hemispheres 39.1
2042 Male, age 76, both hemispheres 37.8
2619 Male, age 74, both hemispheres 37.0
2438 Female, age 94, left hemisphere 36.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.8
Samples: 197

Max nTPM: 101.2
Min nTPM: 9.7
Std nTPM: 18.6
Median nTPM: 41.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 101.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 99.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 94.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 92.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 91.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 87.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 84.7
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 83.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 83.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 83.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 82.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.4
FF:10169-103B7 60 years, female 98.3
FF:10153-102I9 76 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 21.8
Min nTPM: 11.1
Sample A Female 21.8
Sample B Female 17.5
Sample C Male 15.0
Sample D Male 11.1
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.2
Sample A Female 11.3
Sample B Female 14.4
Sample C Male 12.9
Sample D Male 10.2
Subiculum
nTPM: 17.4
Samples: 4

Max nTPM: 19.9
Min nTPM: 15.2
Sample A Female 19.9
Sample B Female 16.3
Sample C Male 18.1
Sample D Male 15.2
Ventral hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 26.4
Min nTPM: 13.2
Sample A Female 26.4
Sample B Female 13.6
Sample C Male 24.7
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 33.8
Min nTPM: 26.3
Sample A Male 26.4
Sample B Male 33.8
Sample C Female 29.8
Sample D Female 26.3
Hippocampal formation
nTPM: 26.6
Samples: 4

Max nTPM: 30.5
Min nTPM: 20.8
Sample A Male 30.5
Sample B Male 30.4
Sample C Female 24.6
Sample D Female 20.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68158074 Antisense, RP_041116_02_G03, Mouse strain C57BL/6J (56 days, male) 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.