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CD44
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:33.0 nTPM
HPA:33.0 nTPM
GTEx:17.8 nTPM
FANTOM5:241.6 Scaled Tags Per Million
Pig:4.4 nTPM
Mouse:6.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005785Antibody CAB000112Antibody CAB000316
Glial cells Not detectedNot detectedHigh
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.0
Sample id Sample description nTPM
Hippocampus
nTPM: 30.9
1855 Male, age 76, left hemisphere 39.9
1898 Male, age 80, left hemisphere 38.3
2148 Female, age 91, left hemisphere 29.2
1911 Female, age 85, right hemisphere 27.7
2529 Female, age 94, left hemisphere 26.0
2621 Female, age 67, right hemisphere 24.2
Dentate gyrus
nTPM: 33.0
2528 Male, age 74, both hemispheres 49.3
2010 Male, age 76, both hemispheres 45.1
2530 Female, age 94, left hemisphere 33.1
2246 Female, age 85, both hemispheres 28.8
2531 Female, age 67, both hemispheres 28.8
1927 Female, age 91, both hemispheres 13.0
Entorhinal gyrus
nTPM: 12.9
2117 Female, age 91, right hemisphere 24.5
1787 Male, age 76, left hemisphere 17.0
2686 Male, age 75, right hemisphere 10.5
2764 Male, age 80, right hemisphere 10.2
1938 Female, age 85, left hemisphere 9.9
2613 Female, age 94, left hemisphere 5.2
Hippocampus, CA1
nTPM: 24.0
2082 Female, age 91, right hemisphere 30.9
2045 Male, age 76, both hemispheres 27.9
2527 Male, age 74, both hemispheres 26.5
1873 Female, age 85, both hemispheres 25.7
2749 Male, age 80, left hemisphere 9.0
Hippocampus, CA2
nTPM: 26.6
2249 Male, age 74, both hemispheres 61.8
1940 Female, age 85, left hemisphere 26.4
2113 Female, age 91, right hemisphere 25.2
2437 Female, age 94, left hemisphere 22.0
1963 Male, age 80, left hemisphere 13.6
1892 Male, age 76, both hemispheres 10.6
Hippocampus, CA3
nTPM: 21.0
2436 Male, age 74, both hemispheres 28.5
1891 Female, age 85, both hemispheres 28.4
2620 Female, age 94, left hemisphere 28.4
1867 Male, age 76, both hemispheres 16.6
2137 Male, age 80, left hemisphere 14.9
2861 Female, age 67, both hemispheres 9.3
Parahippocampal cortex
nTPM: 11.2
2250 Female, age 67, right hemisphere 20.9
2018 Male, age 76, both hemispheres 19.9
2245 Female, age 91, both hemispheres 13.2
1850 Male, age 80, both hemispheres 11.1
2532 Female, age 72, left hemisphere 10.9
1990 Female, age 91, right hemisphere 10.5
2692 Male, age 74, both hemispheres 9.7
1933 Female, age 85, both hemispheres 7.1
2622 Female, age 67, right hemisphere 4.8
2693 Female, age 94, both hemispheres 4.1
Perirhinal gyrus
nTPM: 7.6
2848 Male, age 76, right hemisphere 10.9
2521 Female, age 94, right hemisphere 9.2
1794 Male, age 80, right hemisphere 7.4
1841 Female, age 85, right hemisphere 5.4
1847 Female, age 91, left hemisphere 5.1
Subiculum
nTPM: 23.9
2729 Female, age 91, right hemisphere 37.4
2042 Male, age 76, both hemispheres 31.1
1901 Male, age 80, both hemispheres 28.5
2438 Female, age 94, left hemisphere 19.4
1977 Female, age 85, both hemispheres 16.5
2619 Male, age 74, both hemispheres 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.8
Samples: 197

Max nTPM: 220.3
Min nTPM: 1.6
Std nTPM: 24.3
Median nTPM: 10.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 220.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 146.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 122.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 77.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 77.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 74.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 72.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 68.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 62.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 62.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 60.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 241.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 241.6
FF:10153-102I9 76 years, female 269.8
FF:10169-103B7 60 years, female 213.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.5
Sample A Female 4.9
Sample B Female 4.3
Sample C Male 5.1
Sample D Male 3.5
Entorhinal cortex
nTPM: 3.7
Samples: 4

Max nTPM: 5.8
Min nTPM: 2.1
Sample A Female 5.8
Sample B Female 3.3
Sample C Male 3.4
Sample D Male 2.1
Subiculum
nTPM: 4.2
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.5
Sample A Female 3.7
Sample B Female 3.5
Sample C Male 4.5
Sample D Male 4.9
Ventral hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.2
Sample A Female 4.7
Sample B Female 4.0
Sample C Male 4.9
Sample D Male 3.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.3
Samples: 4

Max nTPM: 11.1
Min nTPM: 3.5
Sample A Male 3.5
Sample B Male 4.0
Sample C Female 6.6
Sample D Female 11.1
Hippocampal formation
nTPM: 2.9
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.0
Sample A Male 3.7
Sample B Male 2.1
Sample C Female 2.0
Sample D Female 3.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
79632244 Antisense, RP_071204_01_A06, Mouse strain C57BL/6J (56 days, male) 0.6
224 Antisense, RP_040324_01_A12, Mouse strain C57BL/6J (56 days, male) 0.5
79556644 Antisense, RP_071204_01_A06, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.