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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:87.8 nTPM
HPA:87.8 nTPM
GTEx:107.3 nTPM
FANTOM5:120.5 Scaled Tags Per Million
Mouse:48.1 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011495
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 87.8
Sample id Sample description nTPM
Hippocampus
nTPM: 84.9
2621 Female, age 67, right hemisphere 94.7
1911 Female, age 85, right hemisphere 85.3
2529 Female, age 94, left hemisphere 85.2
1898 Male, age 80, left hemisphere 83.9
2148 Female, age 91, left hemisphere 82.0
1855 Male, age 76, left hemisphere 77.9
Dentate gyrus
nTPM: 82.2
2530 Female, age 94, left hemisphere 94.5
1927 Female, age 91, both hemispheres 84.9
2246 Female, age 85, both hemispheres 80.3
2531 Female, age 67, both hemispheres 78.8
2010 Male, age 76, both hemispheres 77.4
2528 Male, age 74, both hemispheres 77.0
Entorhinal gyrus
nTPM: 87.6
2613 Female, age 94, left hemisphere 103.7
2764 Male, age 80, right hemisphere 87.8
2686 Male, age 75, right hemisphere 87.5
1787 Male, age 76, left hemisphere 83.7
1938 Female, age 85, left hemisphere 83.4
2117 Female, age 91, right hemisphere 79.2
Hippocampus, CA1
nTPM: 85.4
2749 Male, age 80, left hemisphere 103.6
2527 Male, age 74, both hemispheres 91.1
1873 Female, age 85, both hemispheres 79.8
2082 Female, age 91, right hemisphere 78.8
2045 Male, age 76, both hemispheres 73.5
Hippocampus, CA2
nTPM: 85.8
2437 Female, age 94, left hemisphere 92.7
1963 Male, age 80, left hemisphere 89.7
1892 Male, age 76, both hemispheres 87.9
2249 Male, age 74, both hemispheres 82.7
2113 Female, age 91, right hemisphere 81.1
1940 Female, age 85, left hemisphere 80.5
Hippocampus, CA3
nTPM: 86.8
2137 Male, age 80, left hemisphere 101.2
2861 Female, age 67, both hemispheres 89.9
2436 Male, age 74, both hemispheres 84.3
1867 Male, age 76, both hemispheres 83.9
1891 Female, age 85, both hemispheres 82.4
2620 Female, age 94, left hemisphere 79.1
Parahippocampal cortex
nTPM: 87.8
2622 Female, age 67, right hemisphere 98.4
2245 Female, age 91, both hemispheres 95.9
2532 Female, age 72, left hemisphere 91.7
2692 Male, age 74, both hemispheres 91.2
2693 Female, age 94, both hemispheres 87.4
2250 Female, age 67, right hemisphere 84.5
1850 Male, age 80, both hemispheres 84.1
1933 Female, age 85, both hemispheres 82.1
1990 Female, age 91, right hemisphere 81.9
2018 Male, age 76, both hemispheres 81.1
Perirhinal gyrus
nTPM: 86.0
2521 Female, age 94, right hemisphere 88.4
1847 Female, age 91, left hemisphere 87.1
2848 Male, age 76, right hemisphere 85.7
1794 Male, age 80, right hemisphere 85.3
1841 Female, age 85, right hemisphere 83.5
Subiculum
nTPM: 85.7
2438 Female, age 94, left hemisphere 97.7
1901 Male, age 80, both hemispheres 88.4
2619 Male, age 74, both hemispheres 87.9
1977 Female, age 85, both hemispheres 83.1
2042 Male, age 76, both hemispheres 82.0
2729 Female, age 91, right hemisphere 75.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 107.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 107.3
Samples: 197

Max nTPM: 276.8
Min nTPM: 30.7
Std nTPM: 41.5
Median nTPM: 98.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 276.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 243.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 228.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 209.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 208.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 207.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 198.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 193.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 190.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 188.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 187.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.5
FF:10169-103B7 60 years, female 129.7
FF:10153-102I9 76 years, female 111.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.1
Samples: 4

Max nTPM: 51.3
Min nTPM: 43.5
Sample A Male 48.3
Sample B Male 49.2
Sample C Female 43.5
Sample D Female 51.3
Hippocampal formation
nTPM: 41.4
Samples: 4

Max nTPM: 45.2
Min nTPM: 39.7
Sample A Male 45.2
Sample B Male 39.9
Sample C Female 40.9
Sample D Female 39.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
68632978 Antisense, RP_050125_02_B11, Mouse strain C57BL/6J (56 days, male) 7.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.