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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:9.7 nTPM
HPA:9.7 nTPM
GTEx:12.9 nTPM
FANTOM5:129.3 Scaled Tags Per Million
Pig:19.0 nTPM
Mouse:34.0 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037379
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.7
Sample id Sample description nTPM
Hippocampus
nTPM: 9.2
1911 Female, age 85, right hemisphere 9.9
2529 Female, age 94, left hemisphere 9.5
1898 Male, age 80, left hemisphere 9.3
2148 Female, age 91, left hemisphere 9.2
1855 Male, age 76, left hemisphere 9.1
2621 Female, age 67, right hemisphere 8.6
Dentate gyrus
nTPM: 9.4
2246 Female, age 85, both hemispheres 10.7
2531 Female, age 67, both hemispheres 9.5
1927 Female, age 91, both hemispheres 9.2
2530 Female, age 94, left hemisphere 9.1
2528 Male, age 74, both hemispheres 9.0
2010 Male, age 76, both hemispheres 8.9
Entorhinal gyrus
nTPM: 8.5
1938 Female, age 85, left hemisphere 10.0
2686 Male, age 75, right hemisphere 9.0
2117 Female, age 91, right hemisphere 8.8
1787 Male, age 76, left hemisphere 8.2
2764 Male, age 80, right hemisphere 7.4
2613 Female, age 94, left hemisphere 7.3
Hippocampus, CA1
nTPM: 9.4
1873 Female, age 85, both hemispheres 10.4
2749 Male, age 80, left hemisphere 10.0
2045 Male, age 76, both hemispheres 9.3
2527 Male, age 74, both hemispheres 9.2
2082 Female, age 91, right hemisphere 8.1
Hippocampus, CA2
nTPM: 9.0
1892 Male, age 76, both hemispheres 10.6
1963 Male, age 80, left hemisphere 9.8
1940 Female, age 85, left hemisphere 8.8
2249 Male, age 74, both hemispheres 8.8
2113 Female, age 91, right hemisphere 8.6
2437 Female, age 94, left hemisphere 7.6
Hippocampus, CA3
nTPM: 9.6
1867 Male, age 76, both hemispheres 10.6
1891 Female, age 85, both hemispheres 10.3
2137 Male, age 80, left hemisphere 9.8
2436 Male, age 74, both hemispheres 9.5
2620 Female, age 94, left hemisphere 9.2
2861 Female, age 67, both hemispheres 8.5
Parahippocampal cortex
nTPM: 9.3
1850 Male, age 80, both hemispheres 11.0
2693 Female, age 94, both hemispheres 10.8
2692 Male, age 74, both hemispheres 10.5
1990 Female, age 91, right hemisphere 9.7
2018 Male, age 76, both hemispheres 9.4
2532 Female, age 72, left hemisphere 9.4
1933 Female, age 85, both hemispheres 8.8
2250 Female, age 67, right hemisphere 8.7
2245 Female, age 91, both hemispheres 7.8
2622 Female, age 67, right hemisphere 6.7
Perirhinal gyrus
nTPM: 9.3
2848 Male, age 76, right hemisphere 11.1
1841 Female, age 85, right hemisphere 9.4
2521 Female, age 94, right hemisphere 9.4
1847 Female, age 91, left hemisphere 8.3
1794 Male, age 80, right hemisphere 8.1
Subiculum
nTPM: 9.7
2438 Female, age 94, left hemisphere 10.9
1901 Male, age 80, both hemispheres 10.6
1977 Female, age 85, both hemispheres 9.8
2619 Male, age 74, both hemispheres 9.2
2042 Male, age 76, both hemispheres 8.9
2729 Female, age 91, right hemisphere 8.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 20.3
Min nTPM: 7.3
Std nTPM: 2.4
Median nTPM: 12.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 20.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 19.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 18.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 18.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 18.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 17.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 17.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 17.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 17.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 129.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 129.3
FF:10169-103B7 60 years, female 149.6
FF:10153-102I9 76 years, female 109.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 22.1
Min nTPM: 15.4
Sample A Female 22.1
Sample B Female 19.1
Sample C Male 19.3
Sample D Male 15.4
Entorhinal cortex
nTPM: 16.4
Samples: 4

Max nTPM: 19.9
Min nTPM: 13.2
Sample A Female 16.9
Sample B Female 19.9
Sample C Male 15.5
Sample D Male 13.2
Subiculum
nTPM: 15.8
Samples: 4

Max nTPM: 19.0
Min nTPM: 14.0
Sample A Female 19.0
Sample B Female 14.6
Sample C Male 14.0
Sample D Male 15.6
Ventral hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 20.0
Min nTPM: 12.9
Sample A Female 20.0
Sample B Female 14.9
Sample C Male 12.9
Sample D Male 16.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.0
Samples: 4

Max nTPM: 30.5
Min nTPM: 29.3
Sample A Male 29.7
Sample B Male 30.5
Sample C Female 29.3
Sample D Female 30.5
Hippocampal formation
nTPM: 34.0
Samples: 4

Max nTPM: 35.7
Min nTPM: 32.9
Sample A Male 33.7
Sample B Male 33.7
Sample C Female 35.7
Sample D Female 32.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
322964 Antisense, RP_040609_01_F09, Mouse strain C57BL/6J (56 days, male) 3.5
76098405 Antisense, RP_060626_01_H06, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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