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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.9 nTPM
HPA:14.9 nTPM
GTEx:15.9 nTPM
FANTOM5:18.7 Scaled Tags Per Million
Pig:18.6 nTPM
Mouse:13.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007961
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.9
Sample id Sample description nTPM
Hippocampus
nTPM: 14.9
1898 Male, age 80, left hemisphere 16.4
2529 Female, age 94, left hemisphere 15.9
2148 Female, age 91, left hemisphere 14.8
1855 Male, age 76, left hemisphere 14.7
1911 Female, age 85, right hemisphere 14.6
2621 Female, age 67, right hemisphere 13.2
Dentate gyrus
nTPM: 13.9
2530 Female, age 94, left hemisphere 17.9
2528 Male, age 74, both hemispheres 16.0
2010 Male, age 76, both hemispheres 13.2
2246 Female, age 85, both hemispheres 12.6
1927 Female, age 91, both hemispheres 12.3
2531 Female, age 67, both hemispheres 11.2
Entorhinal gyrus
nTPM: 13.8
2117 Female, age 91, right hemisphere 17.8
2764 Male, age 80, right hemisphere 14.1
1938 Female, age 85, left hemisphere 13.9
2613 Female, age 94, left hemisphere 13.1
1787 Male, age 76, left hemisphere 12.8
2686 Male, age 75, right hemisphere 11.0
Hippocampus, CA1
nTPM: 14.6
2527 Male, age 74, both hemispheres 17.1
1873 Female, age 85, both hemispheres 15.6
2749 Male, age 80, left hemisphere 15.2
2082 Female, age 91, right hemisphere 13.6
2045 Male, age 76, both hemispheres 11.5
Hippocampus, CA2
nTPM: 14.7
2249 Male, age 74, both hemispheres 17.6
1963 Male, age 80, left hemisphere 16.3
2113 Female, age 91, right hemisphere 14.1
1892 Male, age 76, both hemispheres 13.5
1940 Female, age 85, left hemisphere 13.4
2437 Female, age 94, left hemisphere 13.0
Hippocampus, CA3
nTPM: 13.8
2436 Male, age 74, both hemispheres 17.8
1891 Female, age 85, both hemispheres 14.6
1867 Male, age 76, both hemispheres 13.4
2620 Female, age 94, left hemisphere 12.9
2137 Male, age 80, left hemisphere 12.7
2861 Female, age 67, both hemispheres 11.6
Parahippocampal cortex
nTPM: 12.4
1933 Female, age 85, both hemispheres 13.6
2692 Male, age 74, both hemispheres 13.1
2250 Female, age 67, right hemisphere 13.0
2622 Female, age 67, right hemisphere 12.8
1850 Male, age 80, both hemispheres 12.7
1990 Female, age 91, right hemisphere 12.5
2018 Male, age 76, both hemispheres 12.1
2532 Female, age 72, left hemisphere 11.7
2245 Female, age 91, both hemispheres 11.4
2693 Female, age 94, both hemispheres 10.7
Perirhinal gyrus
nTPM: 12.0
1847 Female, age 91, left hemisphere 12.9
1794 Male, age 80, right hemisphere 12.7
1841 Female, age 85, right hemisphere 12.2
2521 Female, age 94, right hemisphere 11.6
2848 Male, age 76, right hemisphere 10.6
Subiculum
nTPM: 14.1
2729 Female, age 91, right hemisphere 17.0
2619 Male, age 74, both hemispheres 15.0
1901 Male, age 80, both hemispheres 14.5
1977 Female, age 85, both hemispheres 13.0
2042 Male, age 76, both hemispheres 13.0
2438 Female, age 94, left hemisphere 11.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 27.3
Min nTPM: 3.2
Std nTPM: 5.0
Median nTPM: 16.0
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 27.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 26.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 26.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 26.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 25.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 25.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 25.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 25.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 25.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 25.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.7
FF:10153-102I9 76 years, female 21.7
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 19.9
Min nTPM: 11.0
Sample A Female 19.9
Sample B Female 17.3
Sample C Male 16.2
Sample D Male 11.0
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 17.0
Min nTPM: 13.4
Sample A Female 16.2
Sample B Female 16.4
Sample C Male 17.0
Sample D Male 13.4
Subiculum
nTPM: 18.1
Samples: 4

Max nTPM: 22.1
Min nTPM: 13.8
Sample A Female 22.1
Sample B Female 18.8
Sample C Male 17.8
Sample D Male 13.8
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 24.4
Min nTPM: 15.2
Sample A Female 19.3
Sample B Female 15.6
Sample C Male 24.4
Sample D Male 15.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 13.1
Min nTPM: 9.5
Sample A Male 10.9
Sample B Male 9.5
Sample C Female 13.1
Sample D Female 11.9
Hippocampal formation
nTPM: 13.3
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.4
Sample A Male 12.2
Sample B Male 11.4
Sample C Female 14.1
Sample D Female 15.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70812744 Antisense, RP_050712_02_E06, Mouse strain C57BL/6J (56 days, male) 0.8
68302011 Antisense, RP_041130_02_C03, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.