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CTNNA1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:83.7 nTPM
HPA:83.7 nTPM
GTEx:97.9 nTPM
FANTOM5:152.3 Scaled Tags Per Million
Pig:33.1 nTPM
Mouse:42.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046119Antibody CAB021089
Glial cells Not detectedLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.7
Sample id Sample description nTPM
Hippocampus
nTPM: 75.6
2529 Female, age 94, left hemisphere 82.3
1911 Female, age 85, right hemisphere 80.7
2621 Female, age 67, right hemisphere 74.5
1898 Male, age 80, left hemisphere 73.6
1855 Male, age 76, left hemisphere 73.5
2148 Female, age 91, left hemisphere 68.8
Dentate gyrus
nTPM: 74.8
2528 Male, age 74, both hemispheres 81.4
2530 Female, age 94, left hemisphere 79.4
2010 Male, age 76, both hemispheres 78.5
2246 Female, age 85, both hemispheres 73.8
2531 Female, age 67, both hemispheres 71.1
1927 Female, age 91, both hemispheres 64.5
Entorhinal gyrus
nTPM: 77.3
2117 Female, age 91, right hemisphere 88.8
2686 Male, age 75, right hemisphere 78.3
1938 Female, age 85, left hemisphere 76.9
1787 Male, age 76, left hemisphere 74.9
2613 Female, age 94, left hemisphere 74.1
2764 Male, age 80, right hemisphere 71.0
Hippocampus, CA1
nTPM: 72.7
2527 Male, age 74, both hemispheres 81.4
2082 Female, age 91, right hemisphere 76.5
1873 Female, age 85, both hemispheres 72.2
2045 Male, age 76, both hemispheres 68.1
2749 Male, age 80, left hemisphere 65.0
Hippocampus, CA2
nTPM: 76.9
2249 Male, age 74, both hemispheres 89.4
2113 Female, age 91, right hemisphere 77.5
1940 Female, age 85, left hemisphere 76.9
2437 Female, age 94, left hemisphere 76.7
1963 Male, age 80, left hemisphere 75.7
1892 Male, age 76, both hemispheres 65.2
Hippocampus, CA3
nTPM: 72.9
1891 Female, age 85, both hemispheres 86.5
2436 Male, age 74, both hemispheres 83.8
1867 Male, age 76, both hemispheres 72.5
2137 Male, age 80, left hemisphere 66.5
2861 Female, age 67, both hemispheres 64.7
2620 Female, age 94, left hemisphere 63.1
Parahippocampal cortex
nTPM: 74.8
2692 Male, age 74, both hemispheres 80.4
1990 Female, age 91, right hemisphere 79.0
2532 Female, age 72, left hemisphere 77.8
2018 Male, age 76, both hemispheres 77.6
2250 Female, age 67, right hemisphere 75.7
1933 Female, age 85, both hemispheres 74.6
1850 Male, age 80, both hemispheres 74.1
2245 Female, age 91, both hemispheres 71.7
2622 Female, age 67, right hemisphere 69.2
2693 Female, age 94, both hemispheres 68.2
Perirhinal gyrus
nTPM: 72.2
1794 Male, age 80, right hemisphere 74.3
2521 Female, age 94, right hemisphere 74.0
1841 Female, age 85, right hemisphere 72.5
2848 Male, age 76, right hemisphere 70.6
1847 Female, age 91, left hemisphere 69.3
Subiculum
nTPM: 83.7
2438 Female, age 94, left hemisphere 87.4
2042 Male, age 76, both hemispheres 87.2
1901 Male, age 80, both hemispheres 84.9
1977 Female, age 85, both hemispheres 84.8
2619 Male, age 74, both hemispheres 79.2
2729 Female, age 91, right hemisphere 78.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 97.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 97.9
Samples: 197

Max nTPM: 207.6
Min nTPM: 40.4
Std nTPM: 31.5
Median nTPM: 93.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 207.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 197.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 182.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 175.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 171.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 165.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 165.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 159.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 157.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 154.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 153.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 152.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.3
FF:10153-102I9 76 years, female 165.5
FF:10169-103B7 60 years, female 139.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.1
Samples: 4

Max nTPM: 46.3
Min nTPM: 19.9
Sample A Female 46.3
Sample B Female 26.2
Sample C Male 40.1
Sample D Male 19.9
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 27.9
Min nTPM: 17.5
Sample A Female 27.1
Sample B Female 27.9
Sample C Male 23.7
Sample D Male 17.5
Subiculum
nTPM: 29.3
Samples: 4

Max nTPM: 33.9
Min nTPM: 26.5
Sample A Female 33.9
Sample B Female 27.5
Sample C Male 26.5
Sample D Male 29.2
Ventral hippocampus
nTPM: 29.3
Samples: 4

Max nTPM: 37.0
Min nTPM: 22.6
Sample A Female 32.1
Sample B Female 22.6
Sample C Male 37.0
Sample D Male 25.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.3
Samples: 4

Max nTPM: 46.2
Min nTPM: 38.1
Sample A Male 46.2
Sample B Male 43.5
Sample C Female 41.2
Sample D Female 38.1
Hippocampal formation
nTPM: 41.2
Samples: 4

Max nTPM: 47.3
Min nTPM: 34.3
Sample A Male 34.3
Sample B Male 39.7
Sample C Female 43.4
Sample D Female 47.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
77455062 Antisense, RP_070129_02_A10, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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