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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:25.0 nTPM
HPA:25.0 nTPM
GTEx:29.4 nTPM
FANTOM5:52.1 Scaled Tags Per Million
Pig:7.6 nTPM
Mouse:21.5 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017210Antibody HPA041679
Glial cells LowNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.0
Sample id Sample description nTPM
Hippocampus
nTPM: 23.6
2529 Female, age 94, left hemisphere 25.9
1911 Female, age 85, right hemisphere 25.7
1855 Male, age 76, left hemisphere 24.6
1898 Male, age 80, left hemisphere 22.5
2148 Female, age 91, left hemisphere 22.3
2621 Female, age 67, right hemisphere 20.7
Dentate gyrus
nTPM: 23.5
2528 Male, age 74, both hemispheres 26.3
2010 Male, age 76, both hemispheres 25.0
1927 Female, age 91, both hemispheres 24.4
2246 Female, age 85, both hemispheres 22.5
2530 Female, age 94, left hemisphere 21.9
2531 Female, age 67, both hemispheres 21.0
Entorhinal gyrus
nTPM: 23.1
1938 Female, age 85, left hemisphere 25.0
2117 Female, age 91, right hemisphere 24.5
1787 Male, age 76, left hemisphere 23.2
2686 Male, age 75, right hemisphere 22.2
2613 Female, age 94, left hemisphere 22.1
2764 Male, age 80, right hemisphere 21.6
Hippocampus, CA1
nTPM: 24.1
2082 Female, age 91, right hemisphere 26.0
2527 Male, age 74, both hemispheres 25.6
1873 Female, age 85, both hemispheres 24.3
2045 Male, age 76, both hemispheres 23.4
2749 Male, age 80, left hemisphere 21.4
Hippocampus, CA2
nTPM: 25.0
2249 Male, age 74, both hemispheres 28.9
2113 Female, age 91, right hemisphere 25.8
1940 Female, age 85, left hemisphere 24.6
1892 Male, age 76, both hemispheres 24.3
1963 Male, age 80, left hemisphere 23.3
2437 Female, age 94, left hemisphere 23.1
Hippocampus, CA3
nTPM: 24.1
1891 Female, age 85, both hemispheres 29.1
2436 Male, age 74, both hemispheres 28.3
1867 Male, age 76, both hemispheres 24.7
2137 Male, age 80, left hemisphere 22.5
2861 Female, age 67, both hemispheres 20.2
2620 Female, age 94, left hemisphere 19.7
Parahippocampal cortex
nTPM: 23.9
1850 Male, age 80, both hemispheres 26.1
1933 Female, age 85, both hemispheres 25.3
2693 Female, age 94, both hemispheres 25.2
2018 Male, age 76, both hemispheres 25.1
2250 Female, age 67, right hemisphere 25.1
1990 Female, age 91, right hemisphere 24.3
2692 Male, age 74, both hemispheres 23.3
2532 Female, age 72, left hemisphere 22.3
2245 Female, age 91, both hemispheres 22.2
2622 Female, age 67, right hemisphere 19.6
Perirhinal gyrus
nTPM: 24.9
1841 Female, age 85, right hemisphere 26.5
2848 Male, age 76, right hemisphere 26.4
1847 Female, age 91, left hemisphere 24.6
2521 Female, age 94, right hemisphere 24.0
1794 Male, age 80, right hemisphere 23.2
Subiculum
nTPM: 25.0
2438 Female, age 94, left hemisphere 26.3
2042 Male, age 76, both hemispheres 26.1
1901 Male, age 80, both hemispheres 25.8
2729 Female, age 91, right hemisphere 25.6
1977 Female, age 85, both hemispheres 24.0
2619 Male, age 74, both hemispheres 22.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.4
Samples: 197

Max nTPM: 58.0
Min nTPM: 15.9
Std nTPM: 7.5
Median nTPM: 28.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 58.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 51.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 50.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 50.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 49.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 48.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 46.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 45.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 45.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 43.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 43.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.1
FF:10153-102I9 76 years, female 53.0
FF:10169-103B7 60 years, female 51.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.6
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.4
Sample A Female 8.6
Sample B Female 6.4
Sample C Male 9.1
Sample D Male 6.4
Entorhinal cortex
nTPM: 6.8
Samples: 4

Max nTPM: 7.8
Min nTPM: 5.6
Sample A Female 6.3
Sample B Female 7.8
Sample C Male 7.3
Sample D Male 5.6
Subiculum
nTPM: 7.5
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.6
Sample A Female 8.7
Sample B Female 6.6
Sample C Male 6.8
Sample D Male 7.7
Ventral hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 7.6
Min nTPM: 6.4
Sample A Female 7.0
Sample B Female 6.7
Sample C Male 7.6
Sample D Male 6.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 20.1
Min nTPM: 17.6
Sample A Male 19.5
Sample B Male 17.6
Sample C Female 20.1
Sample D Female 18.3
Hippocampal formation
nTPM: 21.5
Samples: 4

Max nTPM: 24.2
Min nTPM: 17.3
Sample A Male 21.4
Sample B Male 23.1
Sample C Female 17.3
Sample D Female 24.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
68341513 Antisense, RP_041207_01_F10, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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