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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.3 nTPM
HPA:32.3 nTPM
GTEx:30.2 nTPM
FANTOM5:119.8 Scaled Tags Per Million
Pig:27.4 nTPM
Mouse:48.4 nTPM
Allen mouse:8.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 30.7
1855 Male, age 76, left hemisphere 32.7
1898 Male, age 80, left hemisphere 32.4
2621 Female, age 67, right hemisphere 30.3
1911 Female, age 85, right hemisphere 29.7
2529 Female, age 94, left hemisphere 29.7
2148 Female, age 91, left hemisphere 29.2
Dentate gyrus
nTPM: 29.9
2010 Male, age 76, both hemispheres 34.3
2528 Male, age 74, both hemispheres 30.6
2246 Female, age 85, both hemispheres 29.9
2530 Female, age 94, left hemisphere 29.6
1927 Female, age 91, both hemispheres 27.7
2531 Female, age 67, both hemispheres 27.1
Entorhinal gyrus
nTPM: 27.2
2117 Female, age 91, right hemisphere 31.7
1787 Male, age 76, left hemisphere 28.9
1938 Female, age 85, left hemisphere 28.9
2764 Male, age 80, right hemisphere 25.5
2613 Female, age 94, left hemisphere 25.2
2686 Male, age 75, right hemisphere 23.0
Hippocampus, CA1
nTPM: 32.3
2749 Male, age 80, left hemisphere 37.6
2045 Male, age 76, both hemispheres 35.8
1873 Female, age 85, both hemispheres 31.2
2527 Male, age 74, both hemispheres 29.7
2082 Female, age 91, right hemisphere 27.1
Hippocampus, CA2
nTPM: 29.4
2249 Male, age 74, both hemispheres 34.0
1963 Male, age 80, left hemisphere 30.1
1892 Male, age 76, both hemispheres 29.9
1940 Female, age 85, left hemisphere 28.2
2113 Female, age 91, right hemisphere 27.6
2437 Female, age 94, left hemisphere 26.8
Hippocampus, CA3
nTPM: 31.4
2436 Male, age 74, both hemispheres 35.4
1867 Male, age 76, both hemispheres 33.4
2137 Male, age 80, left hemisphere 33.3
2620 Female, age 94, left hemisphere 30.4
2861 Female, age 67, both hemispheres 28.1
1891 Female, age 85, both hemispheres 27.9
Parahippocampal cortex
nTPM: 26.5
2018 Male, age 76, both hemispheres 31.1
2250 Female, age 67, right hemisphere 27.9
1933 Female, age 85, both hemispheres 27.2
2245 Female, age 91, both hemispheres 26.7
2692 Male, age 74, both hemispheres 26.4
1850 Male, age 80, both hemispheres 26.1
1990 Female, age 91, right hemisphere 26.1
2532 Female, age 72, left hemisphere 25.6
2693 Female, age 94, both hemispheres 23.9
2622 Female, age 67, right hemisphere 23.8
Perirhinal gyrus
nTPM: 25.7
2521 Female, age 94, right hemisphere 26.5
1794 Male, age 80, right hemisphere 26.3
1847 Female, age 91, left hemisphere 26.2
1841 Female, age 85, right hemisphere 26.0
2848 Male, age 76, right hemisphere 23.7
Subiculum
nTPM: 28.6
2042 Male, age 76, both hemispheres 32.4
2729 Female, age 91, right hemisphere 29.9
1901 Male, age 80, both hemispheres 28.3
2619 Male, age 74, both hemispheres 27.9
1977 Female, age 85, both hemispheres 26.6
2438 Female, age 94, left hemisphere 26.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.2
Samples: 197

Max nTPM: 82.9
Min nTPM: 7.6
Std nTPM: 10.1
Median nTPM: 30.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 82.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 56.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 54.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 53.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 51.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 48.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 47.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 47.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 46.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 46.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 46.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.8
FF:10169-103B7 60 years, female 127.6
FF:10153-102I9 76 years, female 112.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 32.7
Min nTPM: 20.2
Sample A Female 32.7
Sample B Female 24.1
Sample C Male 31.8
Sample D Male 20.2
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 25.1
Min nTPM: 18.9
Sample A Female 25.1
Sample B Female 23.0
Sample C Male 24.8
Sample D Male 18.9
Subiculum
nTPM: 27.0
Samples: 4

Max nTPM: 30.8
Min nTPM: 25.1
Sample A Female 30.8
Sample B Female 26.1
Sample C Male 25.1
Sample D Male 26.0
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 36.1
Min nTPM: 21.2
Sample A Female 26.2
Sample B Female 21.2
Sample C Male 36.1
Sample D Male 26.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.3
Samples: 4

Max nTPM: 45.8
Min nTPM: 40.0
Sample A Male 40.0
Sample B Male 41.8
Sample C Female 41.7
Sample D Female 45.8
Hippocampal formation
nTPM: 48.4
Samples: 4

Max nTPM: 55.3
Min nTPM: 42.5
Sample A Male 42.5
Sample B Male 46.8
Sample C Female 55.3
Sample D Female 48.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.7
512530 Antisense, RP_040809_02_B01, Mouse strain C57BL/6J (56 days, male) 8.7

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The Human Protein Atlas

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