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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:16.3 nTPM
HPA:16.3 nTPM
GTEx:10.2 nTPM
FANTOM5:15.6 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:8.3 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042610
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.3
Sample id Sample description nTPM
Hippocampus
nTPM: 14.2
1855 Male, age 76, left hemisphere 14.8
2621 Female, age 67, right hemisphere 14.7
1898 Male, age 80, left hemisphere 14.6
2529 Female, age 94, left hemisphere 14.6
1911 Female, age 85, right hemisphere 13.3
2148 Female, age 91, left hemisphere 13.2
Dentate gyrus
nTPM: 14.2
2528 Male, age 74, both hemispheres 15.2
2010 Male, age 76, both hemispheres 14.7
1927 Female, age 91, both hemispheres 14.5
2530 Female, age 94, left hemisphere 14.1
2246 Female, age 85, both hemispheres 13.9
2531 Female, age 67, both hemispheres 13.0
Entorhinal gyrus
nTPM: 14.5
2764 Male, age 80, right hemisphere 16.4
2613 Female, age 94, left hemisphere 14.7
1787 Male, age 76, left hemisphere 14.4
2686 Male, age 75, right hemisphere 13.9
1938 Female, age 85, left hemisphere 13.8
2117 Female, age 91, right hemisphere 13.8
Hippocampus, CA1
nTPM: 14.4
2749 Male, age 80, left hemisphere 16.1
1873 Female, age 85, both hemispheres 14.4
2045 Male, age 76, both hemispheres 14.0
2527 Male, age 74, both hemispheres 13.8
2082 Female, age 91, right hemisphere 13.7
Hippocampus, CA2
nTPM: 14.2
1892 Male, age 76, both hemispheres 15.1
2249 Male, age 74, both hemispheres 15.0
1963 Male, age 80, left hemisphere 14.2
1940 Female, age 85, left hemisphere 13.8
2437 Female, age 94, left hemisphere 13.8
2113 Female, age 91, right hemisphere 12.9
Hippocampus, CA3
nTPM: 14.4
2137 Male, age 80, left hemisphere 15.8
2436 Male, age 74, both hemispheres 15.4
2620 Female, age 94, left hemisphere 14.8
1867 Male, age 76, both hemispheres 14.6
1891 Female, age 85, both hemispheres 13.6
2861 Female, age 67, both hemispheres 12.3
Parahippocampal cortex
nTPM: 14.6
1850 Male, age 80, both hemispheres 17.6
1933 Female, age 85, both hemispheres 15.8
2532 Female, age 72, left hemisphere 15.0
2245 Female, age 91, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.3
2018 Male, age 76, both hemispheres 14.0
2250 Female, age 67, right hemisphere 14.0
2692 Male, age 74, both hemispheres 13.8
2693 Female, age 94, both hemispheres 13.8
2622 Female, age 67, right hemisphere 13.4
Perirhinal gyrus
nTPM: 16.3
1794 Male, age 80, right hemisphere 18.1
1841 Female, age 85, right hemisphere 16.8
1847 Female, age 91, left hemisphere 16.1
2848 Male, age 76, right hemisphere 15.5
2521 Female, age 94, right hemisphere 15.1
Subiculum
nTPM: 13.7
2438 Female, age 94, left hemisphere 14.1
2729 Female, age 91, right hemisphere 14.0
1901 Male, age 80, both hemispheres 13.9
1977 Female, age 85, both hemispheres 13.6
2042 Male, age 76, both hemispheres 13.5
2619 Male, age 74, both hemispheres 13.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.2
Samples: 197

Max nTPM: 23.8
Min nTPM: 3.7
Std nTPM: 2.5
Median nTPM: 9.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 20.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 17.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 17.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 16.6
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 16.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 16.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 16.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 15.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 15.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 15.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.6
FF:10153-102I9 76 years, female 17.7
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 12.4
Min nTPM: 8.3
Sample A Female 12.4
Sample B Female 8.3
Sample C Male 10.4
Sample D Male 9.8
Entorhinal cortex
nTPM: 11.5
Samples: 4

Max nTPM: 14.0
Min nTPM: 9.7
Sample A Female 10.6
Sample B Female 14.0
Sample C Male 9.7
Sample D Male 11.7
Subiculum
nTPM: 11.0
Samples: 4

Max nTPM: 14.2
Min nTPM: 8.7
Sample A Female 14.2
Sample B Female 11.1
Sample C Male 9.8
Sample D Male 8.7
Ventral hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 10.9
Min nTPM: 8.5
Sample A Female 10.1
Sample B Female 10.9
Sample C Male 10.4
Sample D Male 8.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 8.6
Min nTPM: 7.9
Sample A Male 8.3
Sample B Male 8.5
Sample C Female 7.9
Sample D Female 8.6
Hippocampal formation
nTPM: 8.1
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.9
Sample A Male 9.5
Sample B Male 8.5
Sample C Female 7.3
Sample D Female 6.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
70437852 Antisense, RP_050614_03_A07, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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