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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:266.6 nTPM
HPA:266.6 nTPM
GTEx:308.3 nTPM
FANTOM5:165.3 Scaled Tags Per Million
Pig:161.0 nTPM
Mouse:77.4 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 266.6
Sample id Sample description nTPM
Hippocampus
nTPM: 213.8
2621 Female, age 67, right hemisphere 231.9
1855 Male, age 76, left hemisphere 225.3
2529 Female, age 94, left hemisphere 214.1
1911 Female, age 85, right hemisphere 208.6
2148 Female, age 91, left hemisphere 202.7
1898 Male, age 80, left hemisphere 200.0
Dentate gyrus
nTPM: 212.8
2531 Female, age 67, both hemispheres 248.7
2530 Female, age 94, left hemisphere 222.5
1927 Female, age 91, both hemispheres 209.8
2246 Female, age 85, both hemispheres 206.7
2010 Male, age 76, both hemispheres 204.6
2528 Male, age 74, both hemispheres 184.7
Entorhinal gyrus
nTPM: 227.4
2613 Female, age 94, left hemisphere 250.6
2686 Male, age 75, right hemisphere 236.0
2764 Male, age 80, right hemisphere 232.1
1787 Male, age 76, left hemisphere 232.0
1938 Female, age 85, left hemisphere 220.5
2117 Female, age 91, right hemisphere 193.3
Hippocampus, CA1
nTPM: 221.5
2749 Male, age 80, left hemisphere 264.7
2045 Male, age 76, both hemispheres 238.0
2527 Male, age 74, both hemispheres 207.5
2082 Female, age 91, right hemisphere 205.2
1873 Female, age 85, both hemispheres 192.4
Hippocampus, CA2
nTPM: 212.6
1892 Male, age 76, both hemispheres 235.1
1940 Female, age 85, left hemisphere 219.3
2113 Female, age 91, right hemisphere 216.0
2437 Female, age 94, left hemisphere 210.2
1963 Male, age 80, left hemisphere 209.8
2249 Male, age 74, both hemispheres 185.2
Hippocampus, CA3
nTPM: 226.6
2137 Male, age 80, left hemisphere 291.6
1867 Male, age 76, both hemispheres 243.3
2861 Female, age 67, both hemispheres 242.7
2620 Female, age 94, left hemisphere 209.4
1891 Female, age 85, both hemispheres 192.0
2436 Male, age 74, both hemispheres 180.6
Parahippocampal cortex
nTPM: 241.9
2622 Female, age 67, right hemisphere 281.1
2245 Female, age 91, both hemispheres 275.6
2532 Female, age 72, left hemisphere 259.7
2018 Male, age 76, both hemispheres 253.6
2693 Female, age 94, both hemispheres 244.8
2250 Female, age 67, right hemisphere 238.8
1850 Male, age 80, both hemispheres 234.9
1933 Female, age 85, both hemispheres 219.1
1990 Female, age 91, right hemisphere 210.5
2692 Male, age 74, both hemispheres 201.0
Perirhinal gyrus
nTPM: 266.6
2521 Female, age 94, right hemisphere 303.7
1794 Male, age 80, right hemisphere 276.3
2848 Male, age 76, right hemisphere 267.8
1841 Female, age 85, right hemisphere 251.7
1847 Female, age 91, left hemisphere 233.5
Subiculum
nTPM: 205.6
2042 Male, age 76, both hemispheres 214.5
1901 Male, age 80, both hemispheres 212.2
1977 Female, age 85, both hemispheres 210.6
2438 Female, age 94, left hemisphere 206.5
2619 Male, age 74, both hemispheres 198.2
2729 Female, age 91, right hemisphere 191.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 308.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 308.3
Samples: 197

Max nTPM: 999.2
Min nTPM: 47.5
Std nTPM: 155.9
Median nTPM: 270.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 999.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 827.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 770.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 764.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 685.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 678.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 654.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 640.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 637.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 624.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 609.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 165.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 165.3
FF:10153-102I9 76 years, female 243.8
FF:10169-103B7 60 years, female 86.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 161.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 157.0
Samples: 4

Max nTPM: 192.4
Min nTPM: 93.5
Sample A Female 192.4
Sample B Female 164.6
Sample C Male 177.4
Sample D Male 93.5
Entorhinal cortex
nTPM: 161.0
Samples: 4

Max nTPM: 208.3
Min nTPM: 131.2
Sample A Female 146.5
Sample B Female 157.8
Sample C Male 208.3
Sample D Male 131.2
Subiculum
nTPM: 146.3
Samples: 4

Max nTPM: 199.7
Min nTPM: 108.2
Sample A Female 199.7
Sample B Female 135.0
Sample C Male 142.3
Sample D Male 108.2
Ventral hippocampus
nTPM: 158.9
Samples: 4

Max nTPM: 182.6
Min nTPM: 129.3
Sample A Female 141.5
Sample B Female 129.3
Sample C Male 182.6
Sample D Male 182.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 77.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 77.4
Samples: 4

Max nTPM: 85.5
Min nTPM: 71.6
Sample A Male 80.6
Sample B Male 85.5
Sample C Female 72.0
Sample D Female 71.6
Hippocampal formation
nTPM: 68.9
Samples: 4

Max nTPM: 73.5
Min nTPM: 64.2
Sample A Male 73.5
Sample B Male 65.6
Sample C Female 64.2
Sample D Female 72.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
68797501 Antisense, RP_050125_02_E12, Mouse strain C57BL/6J (56 days, male) 11.6

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The Human Protein Atlas

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