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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.8 nTPM
HPA:37.8 nTPM
GTEx:45.7 nTPM
FANTOM5:128.7 Scaled Tags Per Million
Mouse:24.4 nTPM
Allen mouse:27.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.1
1898 Male, age 80, left hemisphere 38.8
2529 Female, age 94, left hemisphere 37.7
1855 Male, age 76, left hemisphere 35.8
2148 Female, age 91, left hemisphere 35.8
1911 Female, age 85, right hemisphere 35.6
2621 Female, age 67, right hemisphere 33.1
Dentate gyrus
nTPM: 34.0
2530 Female, age 94, left hemisphere 35.9
2528 Male, age 74, both hemispheres 35.5
2010 Male, age 76, both hemispheres 35.1
2246 Female, age 85, both hemispheres 34.2
1927 Female, age 91, both hemispheres 33.2
2531 Female, age 67, both hemispheres 30.3
Entorhinal gyrus
nTPM: 37.8
2117 Female, age 91, right hemisphere 39.4
2613 Female, age 94, left hemisphere 38.2
1938 Female, age 85, left hemisphere 38.1
2764 Male, age 80, right hemisphere 37.9
1787 Male, age 76, left hemisphere 37.4
2686 Male, age 75, right hemisphere 35.7
Hippocampus, CA1
nTPM: 36.8
2749 Male, age 80, left hemisphere 43.1
2527 Male, age 74, both hemispheres 38.6
1873 Female, age 85, both hemispheres 36.1
2082 Female, age 91, right hemisphere 35.1
2045 Male, age 76, both hemispheres 31.3
Hippocampus, CA2
nTPM: 34.7
1963 Male, age 80, left hemisphere 37.9
2249 Male, age 74, both hemispheres 35.8
2113 Female, age 91, right hemisphere 35.2
1892 Male, age 76, both hemispheres 34.1
2437 Female, age 94, left hemisphere 33.4
1940 Female, age 85, left hemisphere 32.0
Hippocampus, CA3
nTPM: 34.3
2137 Male, age 80, left hemisphere 40.5
1891 Female, age 85, both hemispheres 34.0
2436 Male, age 74, both hemispheres 33.6
2861 Female, age 67, both hemispheres 33.1
1867 Male, age 76, both hemispheres 33.0
2620 Female, age 94, left hemisphere 31.6
Parahippocampal cortex
nTPM: 35.7
1933 Female, age 85, both hemispheres 38.0
2692 Male, age 74, both hemispheres 37.9
2622 Female, age 67, right hemisphere 37.6
2245 Female, age 91, both hemispheres 36.1
2532 Female, age 72, left hemisphere 36.1
1850 Male, age 80, both hemispheres 35.7
1990 Female, age 91, right hemisphere 35.7
2250 Female, age 67, right hemisphere 35.4
2693 Female, age 94, both hemispheres 32.9
2018 Male, age 76, both hemispheres 31.7
Perirhinal gyrus
nTPM: 36.3
1794 Male, age 80, right hemisphere 38.7
1847 Female, age 91, left hemisphere 38.1
1841 Female, age 85, right hemisphere 36.1
2521 Female, age 94, right hemisphere 35.2
2848 Male, age 76, right hemisphere 33.6
Subiculum
nTPM: 35.7
1901 Male, age 80, both hemispheres 37.2
2619 Male, age 74, both hemispheres 36.3
1977 Female, age 85, both hemispheres 36.1
2729 Female, age 91, right hemisphere 35.7
2438 Female, age 94, left hemisphere 35.1
2042 Male, age 76, both hemispheres 33.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.7
Samples: 197

Max nTPM: 77.8
Min nTPM: 11.1
Std nTPM: 10.3
Median nTPM: 44.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 77.8
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 75.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 73.7
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 72.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 70.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 68.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 68.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 68.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 67.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 66.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 128.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.7
FF:10169-103B7 60 years, female 169.5
FF:10153-102I9 76 years, female 88.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.2
Samples: 4

Max nTPM: 25.4
Min nTPM: 22.4
Sample A Male 23.4
Sample B Male 25.4
Sample C Female 22.4
Sample D Female 25.4
Hippocampal formation
nTPM: 24.4
Samples: 4

Max nTPM: 27.6
Min nTPM: 21.8
Sample A Male 25.4
Sample B Male 21.8
Sample C Female 22.6
Sample D Female 27.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 27.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.3
199204 Antisense, RP_040604_02_D06, Mouse strain C57BL/6J (56 days, male) 27.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.