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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:39.2 nTPM
HPA:39.2 nTPM
GTEx:46.5 nTPM
FANTOM5:27.8 Scaled Tags Per Million
Pig:64.3 nTPM
Mouse:6.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045396Antibody HPA070524Antibody CAB025331
Glial cells Not detectedMediumMedium
Neuronal cells MediumMediumNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.4
1911 Female, age 85, right hemisphere 34.4
2529 Female, age 94, left hemisphere 31.8
2621 Female, age 67, right hemisphere 26.3
2148 Female, age 91, left hemisphere 25.2
1898 Male, age 80, left hemisphere 23.7
1855 Male, age 76, left hemisphere 23.1
Dentate gyrus
nTPM: 28.4
2530 Female, age 94, left hemisphere 36.5
2528 Male, age 74, both hemispheres 29.3
2010 Male, age 76, both hemispheres 28.8
2246 Female, age 85, both hemispheres 27.4
2531 Female, age 67, both hemispheres 25.1
1927 Female, age 91, both hemispheres 23.6
Entorhinal gyrus
nTPM: 30.8
2117 Female, age 91, right hemisphere 40.2
2764 Male, age 80, right hemisphere 37.0
2613 Female, age 94, left hemisphere 28.4
2686 Male, age 75, right hemisphere 27.5
1787 Male, age 76, left hemisphere 27.2
1938 Female, age 85, left hemisphere 24.7
Hippocampus, CA1
nTPM: 25.0
2082 Female, age 91, right hemisphere 32.4
1873 Female, age 85, both hemispheres 27.0
2527 Male, age 74, both hemispheres 26.6
2749 Male, age 80, left hemisphere 21.0
2045 Male, age 76, both hemispheres 18.2
Hippocampus, CA2
nTPM: 29.2
1963 Male, age 80, left hemisphere 33.0
2437 Female, age 94, left hemisphere 32.9
2249 Male, age 74, both hemispheres 31.1
2113 Female, age 91, right hemisphere 31.0
1940 Female, age 85, left hemisphere 27.9
1892 Male, age 76, both hemispheres 19.5
Hippocampus, CA3
nTPM: 23.7
1891 Female, age 85, both hemispheres 44.1
1867 Male, age 76, both hemispheres 25.2
2436 Male, age 74, both hemispheres 21.4
2620 Female, age 94, left hemisphere 19.2
2137 Male, age 80, left hemisphere 17.6
2861 Female, age 67, both hemispheres 14.7
Parahippocampal cortex
nTPM: 26.5
2692 Male, age 74, both hemispheres 37.2
1990 Female, age 91, right hemisphere 33.4
2532 Female, age 72, left hemisphere 30.9
2693 Female, age 94, both hemispheres 28.3
1850 Male, age 80, both hemispheres 27.2
2245 Female, age 91, both hemispheres 24.8
1933 Female, age 85, both hemispheres 24.6
2018 Male, age 76, both hemispheres 24.4
2250 Female, age 67, right hemisphere 19.5
2622 Female, age 67, right hemisphere 14.3
Perirhinal gyrus
nTPM: 20.2
2521 Female, age 94, right hemisphere 23.5
2848 Male, age 76, right hemisphere 21.5
1794 Male, age 80, right hemisphere 20.6
1847 Female, age 91, left hemisphere 19.3
1841 Female, age 85, right hemisphere 16.1
Subiculum
nTPM: 39.2
2042 Male, age 76, both hemispheres 52.4
1901 Male, age 80, both hemispheres 43.8
2438 Female, age 94, left hemisphere 43.8
1977 Female, age 85, both hemispheres 35.8
2619 Male, age 74, both hemispheres 31.8
2729 Female, age 91, right hemisphere 27.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.5
Samples: 197

Max nTPM: 180.5
Min nTPM: 6.1
Std nTPM: 29.7
Median nTPM: 39.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 180.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 167.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 163.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 132.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 124.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 111.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 110.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 109.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 106.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 105.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 103.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.8
FF:10153-102I9 76 years, female 35.9
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 64.3
Samples: 4

Max nTPM: 89.6
Min nTPM: 34.6
Sample A Female 89.6
Sample B Female 56.2
Sample C Male 76.8
Sample D Male 34.6
Entorhinal cortex
nTPM: 43.9
Samples: 4

Max nTPM: 57.6
Min nTPM: 32.4
Sample A Female 36.7
Sample B Female 57.6
Sample C Male 48.7
Sample D Male 32.4
Subiculum
nTPM: 43.9
Samples: 4

Max nTPM: 59.7
Min nTPM: 34.1
Sample A Female 59.7
Sample B Female 42.5
Sample C Male 34.1
Sample D Male 39.4
Ventral hippocampus
nTPM: 51.4
Samples: 4

Max nTPM: 55.1
Min nTPM: 40.8
Sample A Female 55.1
Sample B Female 40.8
Sample C Male 54.5
Sample D Male 55.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.4
Samples: 4

Max nTPM: 4.6
Min nTPM: 1.8
Sample A Male 4.6
Sample B Male 3.5
Sample C Female 3.5
Sample D Female 1.8
Hippocampal formation
nTPM: 6.3
Samples: 4

Max nTPM: 10.1
Min nTPM: 3.1
Sample A Male 3.1
Sample B Male 6.0
Sample C Female 10.1
Sample D Female 5.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71496565 Antisense, RP_050913_04_H01, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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