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CTNNA2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:78.8 nTPM
HPA:78.8 nTPM
GTEx:57.5 nTPM
FANTOM5:187.3 Scaled Tags Per Million
Mouse:81.8 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037175
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.8
Sample id Sample description nTPM
Hippocampus
nTPM: 72.6
2529 Female, age 94, left hemisphere 78.9
2148 Female, age 91, left hemisphere 78.0
1898 Male, age 80, left hemisphere 75.2
1911 Female, age 85, right hemisphere 69.4
2621 Female, age 67, right hemisphere 68.3
1855 Male, age 76, left hemisphere 65.9
Dentate gyrus
nTPM: 67.7
2528 Male, age 74, both hemispheres 83.0
1927 Female, age 91, both hemispheres 81.2
2246 Female, age 85, both hemispheres 63.4
2010 Male, age 76, both hemispheres 61.7
2530 Female, age 94, left hemisphere 58.8
2531 Female, age 67, both hemispheres 58.0
Entorhinal gyrus
nTPM: 68.4
2117 Female, age 91, right hemisphere 83.0
1787 Male, age 76, left hemisphere 72.5
1938 Female, age 85, left hemisphere 70.7
2764 Male, age 80, right hemisphere 68.5
2686 Male, age 75, right hemisphere 61.8
2613 Female, age 94, left hemisphere 54.0
Hippocampus, CA1
nTPM: 75.1
2749 Male, age 80, left hemisphere 96.3
2527 Male, age 74, both hemispheres 91.2
1873 Female, age 85, both hemispheres 72.2
2082 Female, age 91, right hemisphere 59.6
2045 Male, age 76, both hemispheres 56.4
Hippocampus, CA2
nTPM: 69.6
1963 Male, age 80, left hemisphere 84.5
2113 Female, age 91, right hemisphere 70.4
1892 Male, age 76, both hemispheres 69.3
2249 Male, age 74, both hemispheres 69.0
1940 Female, age 85, left hemisphere 64.8
2437 Female, age 94, left hemisphere 59.5
Hippocampus, CA3
nTPM: 69.8
2137 Male, age 80, left hemisphere 86.3
2620 Female, age 94, left hemisphere 70.9
2436 Male, age 74, both hemispheres 69.8
1891 Female, age 85, both hemispheres 66.5
2861 Female, age 67, both hemispheres 64.7
1867 Male, age 76, both hemispheres 60.4
Parahippocampal cortex
nTPM: 77.6
2622 Female, age 67, right hemisphere 93.7
2692 Male, age 74, both hemispheres 88.1
1850 Male, age 80, both hemispheres 82.0
2245 Female, age 91, both hemispheres 80.5
1933 Female, age 85, both hemispheres 77.6
2250 Female, age 67, right hemisphere 76.4
2693 Female, age 94, both hemispheres 73.2
1990 Female, age 91, right hemisphere 72.9
2532 Female, age 72, left hemisphere 69.4
2018 Male, age 76, both hemispheres 62.5
Perirhinal gyrus
nTPM: 78.8
1794 Male, age 80, right hemisphere 85.0
1847 Female, age 91, left hemisphere 83.6
1841 Female, age 85, right hemisphere 80.4
2521 Female, age 94, right hemisphere 75.4
2848 Male, age 76, right hemisphere 69.8
Subiculum
nTPM: 67.9
2619 Male, age 74, both hemispheres 105.4
2729 Female, age 91, right hemisphere 77.4
1977 Female, age 85, both hemispheres 62.4
1901 Male, age 80, both hemispheres 60.2
2438 Female, age 94, left hemisphere 53.4
2042 Male, age 76, both hemispheres 48.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.5
Samples: 197

Max nTPM: 132.0
Min nTPM: 11.1
Std nTPM: 23.4
Median nTPM: 56.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 132.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 110.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 110.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 109.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 108.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 106.0
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 102.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 100.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 98.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 96.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 96.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 187.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 187.3
FF:10169-103B7 60 years, female 216.5
FF:10153-102I9 76 years, female 158.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.8
Samples: 4

Max nTPM: 88.3
Min nTPM: 73.0
Sample A Male 83.4
Sample B Male 82.3
Sample C Female 73.0
Sample D Female 88.3
Hippocampal formation
nTPM: 62.3
Samples: 4

Max nTPM: 67.3
Min nTPM: 57.6
Sample A Male 67.3
Sample B Male 62.7
Sample C Female 61.6
Sample D Female 57.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
73513660 Antisense, RP_051121_02_E02, Mouse strain C57BL/6J (56 days, male) 1.3
74363355 Antisense, RP_051121_02_E02, Mouse strain C57BL/6J (56 days, male) 0.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.