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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:549.1 nTPM
HPA:549.1 nTPM
GTEx:403.6 nTPM
FANTOM5:848.0 Scaled Tags Per Million
Mouse:1196.3 nTPM
Allen mouse:19.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029501Antibody CAB019421
Glial cells LowMedium
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 549.1
Sample id Sample description nTPM
Hippocampus
nTPM: 495.7
1898 Male, age 80, left hemisphere 564.7
2621 Female, age 67, right hemisphere 506.3
2148 Female, age 91, left hemisphere 503.1
1855 Male, age 76, left hemisphere 483.8
2529 Female, age 94, left hemisphere 478.5
1911 Female, age 85, right hemisphere 437.7
Dentate gyrus
nTPM: 503.9
1927 Female, age 91, both hemispheres 551.5
2530 Female, age 94, left hemisphere 511.0
2528 Male, age 74, both hemispheres 508.1
2010 Male, age 76, both hemispheres 505.6
2246 Female, age 85, both hemispheres 489.6
2531 Female, age 67, both hemispheres 457.4
Entorhinal gyrus
nTPM: 497.1
2764 Male, age 80, right hemisphere 536.4
2613 Female, age 94, left hemisphere 515.8
1938 Female, age 85, left hemisphere 509.4
1787 Male, age 76, left hemisphere 486.5
2686 Male, age 75, right hemisphere 468.7
2117 Female, age 91, right hemisphere 465.9
Hippocampus, CA1
nTPM: 511.9
2749 Male, age 80, left hemisphere 549.3
2527 Male, age 74, both hemispheres 515.8
1873 Female, age 85, both hemispheres 502.8
2082 Female, age 91, right hemisphere 502.6
2045 Male, age 76, both hemispheres 488.9
Hippocampus, CA2
nTPM: 512.4
1892 Male, age 76, both hemispheres 582.9
2249 Male, age 74, both hemispheres 557.9
1963 Male, age 80, left hemisphere 506.6
2437 Female, age 94, left hemisphere 495.9
2113 Female, age 91, right hemisphere 467.8
1940 Female, age 85, left hemisphere 463.0
Hippocampus, CA3
nTPM: 524.2
2436 Male, age 74, both hemispheres 640.1
2620 Female, age 94, left hemisphere 529.2
1867 Male, age 76, both hemispheres 514.1
2137 Male, age 80, left hemisphere 507.9
2861 Female, age 67, both hemispheres 495.1
1891 Female, age 85, both hemispheres 459.0
Parahippocampal cortex
nTPM: 497.4
1850 Male, age 80, both hemispheres 543.5
2245 Female, age 91, both hemispheres 513.3
1990 Female, age 91, right hemisphere 509.7
2250 Female, age 67, right hemisphere 502.3
2532 Female, age 72, left hemisphere 500.3
1933 Female, age 85, both hemispheres 488.8
2622 Female, age 67, right hemisphere 484.2
2692 Male, age 74, both hemispheres 479.8
2693 Female, age 94, both hemispheres 478.3
2018 Male, age 76, both hemispheres 473.9
Perirhinal gyrus
nTPM: 549.1
1847 Female, age 91, left hemisphere 611.1
1794 Male, age 80, right hemisphere 582.3
1841 Female, age 85, right hemisphere 543.4
2521 Female, age 94, right hemisphere 513.4
2848 Male, age 76, right hemisphere 495.6
Subiculum
nTPM: 476.8
2619 Male, age 74, both hemispheres 502.6
2438 Female, age 94, left hemisphere 501.2
1901 Male, age 80, both hemispheres 486.2
1977 Female, age 85, both hemispheres 482.9
2729 Female, age 91, right hemisphere 461.2
2042 Male, age 76, both hemispheres 426.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 403.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 403.6
Samples: 197

Max nTPM: 774.8
Min nTPM: 169.5
Std nTPM: 118.2
Median nTPM: 398.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 774.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 757.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 667.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 666.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 653.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 639.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 615.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 615.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 613.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 605.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 604.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 848.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 848.0
FF:10169-103B7 60 years, female 1166.6
FF:10153-102I9 76 years, female 529.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1196.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1097.6
Samples: 4

Max nTPM: 1261.2
Min nTPM: 1020.9
Sample A Male 1020.9
Sample B Male 1055.7
Sample C Female 1052.5
Sample D Female 1261.2
Hippocampal formation
nTPM: 1196.3
Samples: 4

Max nTPM: 1334.6
Min nTPM: 1103.0
Sample A Male 1103.0
Sample B Male 1170.2
Sample C Female 1334.6
Sample D Female 1177.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.6
68269268 Antisense, RP_041208_02_A02, Mouse strain C57BL/6J (56 days, male) 19.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.