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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:80.7 nTPM
HPA:80.7 nTPM
GTEx:83.9 nTPM
FANTOM5:171.7 Scaled Tags Per Million
Pig:217.4 nTPM
Mouse:51.9 nTPM
Allen mouse:16.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062351
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 80.7
Sample id Sample description nTPM
Hippocampus
nTPM: 79.1
1898 Male, age 80, left hemisphere 87.8
2529 Female, age 94, left hemisphere 82.3
1911 Female, age 85, right hemisphere 81.0
1855 Male, age 76, left hemisphere 80.4
2148 Female, age 91, left hemisphere 72.6
2621 Female, age 67, right hemisphere 70.2
Dentate gyrus
nTPM: 77.6
2530 Female, age 94, left hemisphere 84.4
2010 Male, age 76, both hemispheres 81.9
2246 Female, age 85, both hemispheres 79.5
2528 Male, age 74, both hemispheres 78.5
1927 Female, age 91, both hemispheres 75.0
2531 Female, age 67, both hemispheres 66.2
Entorhinal gyrus
nTPM: 74.7
2117 Female, age 91, right hemisphere 87.8
1938 Female, age 85, left hemisphere 84.6
2686 Male, age 75, right hemisphere 71.8
1787 Male, age 76, left hemisphere 70.8
2764 Male, age 80, right hemisphere 69.5
2613 Female, age 94, left hemisphere 63.6
Hippocampus, CA1
nTPM: 80.7
1873 Female, age 85, both hemispheres 87.4
2749 Male, age 80, left hemisphere 87.4
2527 Male, age 74, both hemispheres 79.3
2045 Male, age 76, both hemispheres 76.4
2082 Female, age 91, right hemisphere 72.8
Hippocampus, CA2
nTPM: 75.9
1963 Male, age 80, left hemisphere 82.4
2249 Male, age 74, both hemispheres 80.9
1892 Male, age 76, both hemispheres 77.1
2113 Female, age 91, right hemisphere 74.4
1940 Female, age 85, left hemisphere 71.3
2437 Female, age 94, left hemisphere 69.3
Hippocampus, CA3
nTPM: 72.1
2137 Male, age 80, left hemisphere 86.1
1891 Female, age 85, both hemispheres 86.0
1867 Male, age 76, both hemispheres 73.9
2436 Male, age 74, both hemispheres 65.1
2861 Female, age 67, both hemispheres 60.9
2620 Female, age 94, left hemisphere 60.8
Parahippocampal cortex
nTPM: 72.9
1850 Male, age 80, both hemispheres 82.5
2692 Male, age 74, both hemispheres 77.3
1990 Female, age 91, right hemisphere 76.9
1933 Female, age 85, both hemispheres 76.3
2245 Female, age 91, both hemispheres 75.0
2250 Female, age 67, right hemisphere 73.2
2532 Female, age 72, left hemisphere 72.0
2018 Male, age 76, both hemispheres 68.2
2693 Female, age 94, both hemispheres 66.9
2622 Female, age 67, right hemisphere 60.9
Perirhinal gyrus
nTPM: 75.8
1841 Female, age 85, right hemisphere 80.9
1794 Male, age 80, right hemisphere 76.8
2848 Male, age 76, right hemisphere 75.7
1847 Female, age 91, left hemisphere 73.3
2521 Female, age 94, right hemisphere 72.1
Subiculum
nTPM: 80.1
1901 Male, age 80, both hemispheres 84.3
2438 Female, age 94, left hemisphere 82.7
2042 Male, age 76, both hemispheres 82.1
1977 Female, age 85, both hemispheres 80.9
2729 Female, age 91, right hemisphere 79.1
2619 Male, age 74, both hemispheres 71.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 83.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.9
Samples: 197

Max nTPM: 149.0
Min nTPM: 33.5
Std nTPM: 17.3
Median nTPM: 82.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 149.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 146.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 139.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 138.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 131.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 126.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 124.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 124.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 120.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 120.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 118.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 171.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 171.7
FF:10169-103B7 60 years, female 177.8
FF:10153-102I9 76 years, female 165.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 217.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 217.4
Samples: 4

Max nTPM: 259.0
Min nTPM: 163.0
Sample A Female 259.0
Sample B Female 222.1
Sample C Male 225.6
Sample D Male 163.0
Entorhinal cortex
nTPM: 182.9
Samples: 4

Max nTPM: 197.2
Min nTPM: 175.1
Sample A Female 197.2
Sample B Female 178.3
Sample C Male 180.9
Sample D Male 175.1
Subiculum
nTPM: 201.5
Samples: 4

Max nTPM: 244.8
Min nTPM: 181.0
Sample A Female 244.8
Sample B Female 189.1
Sample C Male 191.1
Sample D Male 181.0
Ventral hippocampus
nTPM: 205.7
Samples: 4

Max nTPM: 233.7
Min nTPM: 175.3
Sample A Female 233.7
Sample B Female 175.3
Sample C Male 205.2
Sample D Male 208.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.9
Samples: 4

Max nTPM: 57.0
Min nTPM: 48.7
Sample A Male 52.7
Sample B Male 49.1
Sample C Female 48.7
Sample D Female 57.0
Hippocampal formation
nTPM: 50.9
Samples: 4

Max nTPM: 53.8
Min nTPM: 44.0
Sample A Male 53.8
Sample B Male 53.3
Sample C Female 52.4
Sample D Female 44.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.5
68162273 Antisense, RP_041122_02_G07, Mouse strain C57BL/6J (56 days, male) 16.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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