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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:63.6 nTPM
HPA:63.6 nTPM
GTEx:63.0 nTPM
FANTOM5:61.5 Scaled Tags Per Million
Pig:52.1 nTPM
Mouse:94.1 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048963Antibody CAB020697
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.6
Sample id Sample description nTPM
Hippocampus
nTPM: 57.4
1855 Male, age 76, left hemisphere 62.5
1898 Male, age 80, left hemisphere 61.4
1911 Female, age 85, right hemisphere 59.3
2148 Female, age 91, left hemisphere 56.5
2621 Female, age 67, right hemisphere 53.3
2529 Female, age 94, left hemisphere 51.5
Dentate gyrus
nTPM: 60.1
1927 Female, age 91, both hemispheres 67.9
2010 Male, age 76, both hemispheres 67.0
2528 Male, age 74, both hemispheres 61.1
2246 Female, age 85, both hemispheres 56.6
2530 Female, age 94, left hemisphere 54.5
2531 Female, age 67, both hemispheres 53.3
Entorhinal gyrus
nTPM: 61.3
2686 Male, age 75, right hemisphere 70.8
1787 Male, age 76, left hemisphere 63.8
2613 Female, age 94, left hemisphere 60.7
1938 Female, age 85, left hemisphere 59.4
2764 Male, age 80, right hemisphere 59.1
2117 Female, age 91, right hemisphere 54.4
Hippocampus, CA1
nTPM: 62.1
2045 Male, age 76, both hemispheres 65.4
2749 Male, age 80, left hemisphere 65.3
1873 Female, age 85, both hemispheres 63.4
2527 Male, age 74, both hemispheres 58.7
2082 Female, age 91, right hemisphere 57.5
Hippocampus, CA2
nTPM: 62.2
1892 Male, age 76, both hemispheres 70.6
2249 Male, age 74, both hemispheres 63.7
1963 Male, age 80, left hemisphere 62.3
1940 Female, age 85, left hemisphere 62.2
2437 Female, age 94, left hemisphere 59.1
2113 Female, age 91, right hemisphere 55.5
Hippocampus, CA3
nTPM: 62.3
2436 Male, age 74, both hemispheres 72.3
1867 Male, age 76, both hemispheres 71.0
2137 Male, age 80, left hemisphere 66.0
1891 Female, age 85, both hemispheres 58.7
2861 Female, age 67, both hemispheres 53.1
2620 Female, age 94, left hemisphere 52.9
Parahippocampal cortex
nTPM: 60.4
2693 Female, age 94, both hemispheres 68.0
1933 Female, age 85, both hemispheres 65.1
1850 Male, age 80, both hemispheres 62.2
1990 Female, age 91, right hemisphere 60.6
2250 Female, age 67, right hemisphere 60.5
2245 Female, age 91, both hemispheres 60.3
2018 Male, age 76, both hemispheres 59.2
2532 Female, age 72, left hemisphere 58.5
2622 Female, age 67, right hemisphere 58.1
2692 Male, age 74, both hemispheres 51.2
Perirhinal gyrus
nTPM: 63.6
1841 Female, age 85, right hemisphere 68.1
2848 Male, age 76, right hemisphere 64.1
2521 Female, age 94, right hemisphere 63.2
1847 Female, age 91, left hemisphere 62.7
1794 Male, age 80, right hemisphere 59.8
Subiculum
nTPM: 57.8
2042 Male, age 76, both hemispheres 64.2
1977 Female, age 85, both hemispheres 60.0
1901 Male, age 80, both hemispheres 58.3
2729 Female, age 91, right hemisphere 56.0
2438 Female, age 94, left hemisphere 54.6
2619 Male, age 74, both hemispheres 54.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.0
Samples: 197

Max nTPM: 158.1
Min nTPM: 20.7
Std nTPM: 21.1
Median nTPM: 58.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 158.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 149.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 127.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 120.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 118.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 118.2
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 115.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 114.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 110.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 105.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 104.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.5
FF:10169-103B7 60 years, female 78.4
FF:10153-102I9 76 years, female 44.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 52.1
Samples: 4

Max nTPM: 69.2
Min nTPM: 37.3
Sample A Female 69.2
Sample B Female 52.7
Sample C Male 49.1
Sample D Male 37.3
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 50.1
Min nTPM: 29.5
Sample A Female 44.7
Sample B Female 50.1
Sample C Male 40.4
Sample D Male 29.5
Subiculum
nTPM: 40.2
Samples: 4

Max nTPM: 49.6
Min nTPM: 31.6
Sample A Female 41.4
Sample B Female 31.6
Sample C Male 38.1
Sample D Male 49.6
Ventral hippocampus
nTPM: 45.5
Samples: 4

Max nTPM: 53.1
Min nTPM: 33.1
Sample A Female 53.1
Sample B Female 33.1
Sample C Male 45.4
Sample D Male 50.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.0
Samples: 4

Max nTPM: 92.8
Min nTPM: 86.3
Sample A Male 92.8
Sample B Male 90.9
Sample C Female 86.3
Sample D Female 89.8
Hippocampal formation
nTPM: 94.1
Samples: 4

Max nTPM: 99.0
Min nTPM: 89.5
Sample A Male 93.7
Sample B Male 89.5
Sample C Female 99.0
Sample D Female 94.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
69526952 Antisense, RP_050421_02_A03, Mouse strain C57BL/6J (56 days, male) 3.7

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The Human Protein Atlas

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