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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.1 nTPM
HPA:10.1 nTPM
GTEx:9.5 nTPM
FANTOM5:27.4 Scaled Tags Per Million
Pig:9.0 nTPM
Mouse:12.5 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.1
Sample id Sample description nTPM
Hippocampus
nTPM: 6.6
2621 Female, age 67, right hemisphere 10.9
2148 Female, age 91, left hemisphere 7.3
1898 Male, age 80, left hemisphere 6.1
1855 Male, age 76, left hemisphere 5.5
2529 Female, age 94, left hemisphere 5.0
1911 Female, age 85, right hemisphere 4.6
Dentate gyrus
nTPM: 7.9
2531 Female, age 67, both hemispheres 13.3
2246 Female, age 85, both hemispheres 7.6
2530 Female, age 94, left hemisphere 7.6
2010 Male, age 76, both hemispheres 7.3
2528 Male, age 74, both hemispheres 5.9
1927 Female, age 91, both hemispheres 5.7
Entorhinal gyrus
nTPM: 7.5
2613 Female, age 94, left hemisphere 10.9
2686 Male, age 75, right hemisphere 9.3
2764 Male, age 80, right hemisphere 8.5
1938 Female, age 85, left hemisphere 6.6
1787 Male, age 76, left hemisphere 5.4
2117 Female, age 91, right hemisphere 4.5
Hippocampus, CA1
nTPM: 7.0
2749 Male, age 80, left hemisphere 10.9
2082 Female, age 91, right hemisphere 6.3
1873 Female, age 85, both hemispheres 6.1
2045 Male, age 76, both hemispheres 6.0
2527 Male, age 74, both hemispheres 5.7
Hippocampus, CA2
nTPM: 4.9
2437 Female, age 94, left hemisphere 7.1
1940 Female, age 85, left hemisphere 6.3
2113 Female, age 91, right hemisphere 5.6
1892 Male, age 76, both hemispheres 4.2
1963 Male, age 80, left hemisphere 3.8
2249 Male, age 74, both hemispheres 2.7
Hippocampus, CA3
nTPM: 10.1
2620 Female, age 94, left hemisphere 19.4
2861 Female, age 67, both hemispheres 18.8
2137 Male, age 80, left hemisphere 11.0
1867 Male, age 76, both hemispheres 4.6
1891 Female, age 85, both hemispheres 4.1
2436 Male, age 74, both hemispheres 2.8
Parahippocampal cortex
nTPM: 8.0
2622 Female, age 67, right hemisphere 12.8
2245 Female, age 91, both hemispheres 10.0
2532 Female, age 72, left hemisphere 9.6
2693 Female, age 94, both hemispheres 9.1
1933 Female, age 85, both hemispheres 7.9
2692 Male, age 74, both hemispheres 7.8
2250 Female, age 67, right hemisphere 7.1
1850 Male, age 80, both hemispheres 6.2
2018 Male, age 76, both hemispheres 4.8
1990 Female, age 91, right hemisphere 4.6
Perirhinal gyrus
nTPM: 7.6
2521 Female, age 94, right hemisphere 10.7
1794 Male, age 80, right hemisphere 8.3
1841 Female, age 85, right hemisphere 7.3
1847 Female, age 91, left hemisphere 7.2
2848 Male, age 76, right hemisphere 4.4
Subiculum
nTPM: 6.3
2619 Male, age 74, both hemispheres 7.6
2438 Female, age 94, left hemisphere 7.1
2042 Male, age 76, both hemispheres 6.6
1901 Male, age 80, both hemispheres 6.5
1977 Female, age 85, both hemispheres 5.5
2729 Female, age 91, right hemisphere 4.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.5
Samples: 197

Max nTPM: 17.8
Min nTPM: 3.9
Std nTPM: 2.6
Median nTPM: 9.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 17.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 16.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 16.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 16.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 15.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 15.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 14.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 14.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 14.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 14.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 14.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.4
FF:10153-102I9 76 years, female 30.7
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.8
Sample A Female 9.3
Sample B Female 8.7
Sample C Male 7.6
Sample D Male 6.8
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 9.3
Min nTPM: 5.6
Sample A Female 9.3
Sample B Female 5.6
Sample C Male 8.9
Sample D Male 8.5
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 11.6
Min nTPM: 7.3
Sample A Female 11.6
Sample B Female 7.5
Sample C Male 9.4
Sample D Male 7.3
Ventral hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 12.3
Min nTPM: 6.7
Sample A Female 7.9
Sample B Female 6.7
Sample C Male 12.3
Sample D Male 9.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 14.2
Min nTPM: 10.1
Sample A Male 13.1
Sample B Male 14.2
Sample C Female 10.1
Sample D Female 12.5
Hippocampal formation
nTPM: 10.7
Samples: 4

Max nTPM: 11.2
Min nTPM: 10.2
Sample A Male 10.6
Sample B Male 10.7
Sample C Female 10.2
Sample D Female 11.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
68798897 Antisense, RP_050217_01_E09, Mouse strain C57BL/6J (56 days, male) 2.9

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The Human Protein Atlas

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