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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:95.2 nTPM
HPA:95.2 nTPM
GTEx:95.3 nTPM
FANTOM5:176.3 Scaled Tags Per Million
Pig:144.2 nTPM
Mouse:465.6 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069590Antibody CAB004360
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 95.2
Sample id Sample description nTPM
Hippocampus
nTPM: 85.9
1898 Male, age 80, left hemisphere 97.7
1855 Male, age 76, left hemisphere 90.2
2621 Female, age 67, right hemisphere 86.1
1911 Female, age 85, right hemisphere 83.8
2529 Female, age 94, left hemisphere 83.4
2148 Female, age 91, left hemisphere 74.4
Dentate gyrus
nTPM: 85.9
2010 Male, age 76, both hemispheres 97.9
2530 Female, age 94, left hemisphere 87.6
1927 Female, age 91, both hemispheres 86.7
2528 Male, age 74, both hemispheres 86.0
2246 Female, age 85, both hemispheres 84.4
2531 Female, age 67, both hemispheres 72.8
Entorhinal gyrus
nTPM: 88.3
1938 Female, age 85, left hemisphere 96.0
1787 Male, age 76, left hemisphere 92.5
2764 Male, age 80, right hemisphere 91.5
2117 Female, age 91, right hemisphere 88.5
2613 Female, age 94, left hemisphere 85.0
2686 Male, age 75, right hemisphere 76.4
Hippocampus, CA1
nTPM: 88.1
2749 Male, age 80, left hemisphere 101.4
2045 Male, age 76, both hemispheres 87.6
1873 Female, age 85, both hemispheres 86.9
2527 Male, age 74, both hemispheres 85.0
2082 Female, age 91, right hemisphere 79.7
Hippocampus, CA2
nTPM: 90.5
1892 Male, age 76, both hemispheres 98.8
2249 Male, age 74, both hemispheres 96.5
1963 Male, age 80, left hemisphere 91.2
1940 Female, age 85, left hemisphere 88.3
2437 Female, age 94, left hemisphere 85.9
2113 Female, age 91, right hemisphere 82.2
Hippocampus, CA3
nTPM: 85.3
1867 Male, age 76, both hemispheres 98.7
2436 Male, age 74, both hemispheres 90.4
1891 Female, age 85, both hemispheres 89.2
2137 Male, age 80, left hemisphere 87.6
2620 Female, age 94, left hemisphere 74.5
2861 Female, age 67, both hemispheres 71.3
Parahippocampal cortex
nTPM: 89.4
1850 Male, age 80, both hemispheres 97.6
2250 Female, age 67, right hemisphere 96.1
1933 Female, age 85, both hemispheres 93.8
2018 Male, age 76, both hemispheres 93.5
2693 Female, age 94, both hemispheres 91.5
1990 Female, age 91, right hemisphere 90.8
2532 Female, age 72, left hemisphere 89.2
2245 Female, age 91, both hemispheres 85.0
2692 Male, age 74, both hemispheres 81.8
2622 Female, age 67, right hemisphere 74.6
Perirhinal gyrus
nTPM: 95.2
1841 Female, age 85, right hemisphere 99.0
1847 Female, age 91, left hemisphere 97.3
2521 Female, age 94, right hemisphere 94.5
1794 Male, age 80, right hemisphere 94.4
2848 Male, age 76, right hemisphere 91.0
Subiculum
nTPM: 90.0
1977 Female, age 85, both hemispheres 95.5
2042 Male, age 76, both hemispheres 94.7
2438 Female, age 94, left hemisphere 93.0
1901 Male, age 80, both hemispheres 90.9
2729 Female, age 91, right hemisphere 83.1
2619 Male, age 74, both hemispheres 82.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 95.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.3
Samples: 197

Max nTPM: 155.3
Min nTPM: 59.0
Std nTPM: 18.9
Median nTPM: 94.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 155.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 153.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 151.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 139.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 135.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 135.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 133.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 131.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 130.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 128.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 128.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 176.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.3
FF:10169-103B7 60 years, female 246.9
FF:10153-102I9 76 years, female 105.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 144.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 144.2
Samples: 4

Max nTPM: 181.8
Min nTPM: 101.2
Sample A Female 181.8
Sample B Female 139.1
Sample C Male 154.5
Sample D Male 101.2
Entorhinal cortex
nTPM: 134.3
Samples: 4

Max nTPM: 157.3
Min nTPM: 112.2
Sample A Female 139.4
Sample B Female 157.3
Sample C Male 128.4
Sample D Male 112.2
Subiculum
nTPM: 136.6
Samples: 4

Max nTPM: 170.9
Min nTPM: 117.9
Sample A Female 170.9
Sample B Female 129.2
Sample C Male 117.9
Sample D Male 128.4
Ventral hippocampus
nTPM: 129.8
Samples: 4

Max nTPM: 146.7
Min nTPM: 109.2
Sample A Female 146.7
Sample B Female 109.2
Sample C Male 138.8
Sample D Male 124.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 465.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 454.5
Samples: 4

Max nTPM: 472.9
Min nTPM: 423.5
Sample A Male 423.5
Sample B Male 455.8
Sample C Female 465.6
Sample D Female 472.9
Hippocampal formation
nTPM: 465.7
Samples: 4

Max nTPM: 534.0
Min nTPM: 428.3
Sample A Male 534.0
Sample B Male 428.3
Sample C Female 462.6
Sample D Female 437.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
71021145 Antisense, RP_050526_02_G07, Mouse strain C57BL/6J (56 days, male) 8.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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