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MBD3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:13.7 nTPM
HPA:13.7 nTPM
GTEx:78.1 nTPM
FANTOM5:14.4 Scaled Tags Per Million
Pig:32.9 nTPM
Mouse:122.0 nTPM
Allen mouse:13.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB013265
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 13.4
2621 Female, age 67, right hemisphere 16.0
2529 Female, age 94, left hemisphere 15.0
2148 Female, age 91, left hemisphere 13.6
1911 Female, age 85, right hemisphere 12.9
1855 Male, age 76, left hemisphere 11.6
1898 Male, age 80, left hemisphere 11.5
Dentate gyrus
nTPM: 12.8
2531 Female, age 67, both hemispheres 16.1
1927 Female, age 91, both hemispheres 13.8
2010 Male, age 76, both hemispheres 12.5
2530 Female, age 94, left hemisphere 11.9
2246 Female, age 85, both hemispheres 11.5
2528 Male, age 74, both hemispheres 11.0
Entorhinal gyrus
nTPM: 12.0
2686 Male, age 75, right hemisphere 15.2
2613 Female, age 94, left hemisphere 12.8
1787 Male, age 76, left hemisphere 11.8
2764 Male, age 80, right hemisphere 11.4
1938 Female, age 85, left hemisphere 10.6
2117 Female, age 91, right hemisphere 10.6
Hippocampus, CA1
nTPM: 12.4
2045 Male, age 76, both hemispheres 14.6
2527 Male, age 74, both hemispheres 13.0
2082 Female, age 91, right hemisphere 12.2
2749 Male, age 80, left hemisphere 12.0
1873 Female, age 85, both hemispheres 10.3
Hippocampus, CA2
nTPM: 12.1
1963 Male, age 80, left hemisphere 17.2
2113 Female, age 91, right hemisphere 13.3
1892 Male, age 76, both hemispheres 12.4
2437 Female, age 94, left hemisphere 11.3
1940 Female, age 85, left hemisphere 10.6
2249 Male, age 74, both hemispheres 8.1
Hippocampus, CA3
nTPM: 13.7
2861 Female, age 67, both hemispheres 18.7
2620 Female, age 94, left hemisphere 17.1
1867 Male, age 76, both hemispheres 13.0
1891 Female, age 85, both hemispheres 12.1
2137 Male, age 80, left hemisphere 11.8
2436 Male, age 74, both hemispheres 9.3
Parahippocampal cortex
nTPM: 10.9
2622 Female, age 67, right hemisphere 13.9
2692 Male, age 74, both hemispheres 13.2
1990 Female, age 91, right hemisphere 11.5
2693 Female, age 94, both hemispheres 11.2
1933 Female, age 85, both hemispheres 10.8
2250 Female, age 67, right hemisphere 10.7
2245 Female, age 91, both hemispheres 10.6
2018 Male, age 76, both hemispheres 9.7
2532 Female, age 72, left hemisphere 9.4
1850 Male, age 80, both hemispheres 8.5
Perirhinal gyrus
nTPM: 9.2
2521 Female, age 94, right hemisphere 10.4
1847 Female, age 91, left hemisphere 9.7
1794 Male, age 80, right hemisphere 9.3
2848 Male, age 76, right hemisphere 8.8
1841 Female, age 85, right hemisphere 7.8
Subiculum
nTPM: 10.7
2042 Male, age 76, both hemispheres 13.9
2729 Female, age 91, right hemisphere 12.2
2619 Male, age 74, both hemispheres 11.9
1901 Male, age 80, both hemispheres 10.2
1977 Female, age 85, both hemispheres 9.3
2438 Female, age 94, left hemisphere 6.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.1
Samples: 197

Max nTPM: 268.7
Min nTPM: 28.2
Std nTPM: 32.6
Median nTPM: 73.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 268.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 231.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 184.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 171.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 153.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 151.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 151.0
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 140.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 140.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 139.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 133.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.4
FF:10153-102I9 76 years, female 22.5
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.0
Samples: 4

Max nTPM: 36.2
Min nTPM: 22.9
Sample A Female 36.2
Sample B Female 28.2
Sample C Male 32.8
Sample D Male 22.9
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 37.9
Min nTPM: 28.7
Sample A Female 32.1
Sample B Female 32.9
Sample C Male 37.9
Sample D Male 28.7
Subiculum
nTPM: 29.7
Samples: 4

Max nTPM: 39.6
Min nTPM: 24.2
Sample A Female 39.6
Sample B Female 27.4
Sample C Male 27.4
Sample D Male 24.2
Ventral hippocampus
nTPM: 28.4
Samples: 4

Max nTPM: 35.5
Min nTPM: 22.2
Sample A Female 25.0
Sample B Female 22.2
Sample C Male 35.5
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 122.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 122.0
Samples: 4

Max nTPM: 126.1
Min nTPM: 116.9
Sample A Male 125.8
Sample B Male 119.2
Sample C Female 116.9
Sample D Female 126.1
Hippocampal formation
nTPM: 116.5
Samples: 4

Max nTPM: 122.3
Min nTPM: 106.3
Sample A Male 106.3
Sample B Male 117.7
Sample C Female 122.3
Sample D Female 119.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.4
69080515 Antisense, RP_050324_02_C04, Mouse strain C57BL/6J (56 days, male) 13.4

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The Human Protein Atlas

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