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RDH11
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:40.4 nTPM
HPA:40.4 nTPM
GTEx:43.4 nTPM
FANTOM5:98.0 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:25.5 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB046011
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.4
Sample id Sample description nTPM
Hippocampus
nTPM: 40.4
1898 Male, age 80, left hemisphere 46.1
2621 Female, age 67, right hemisphere 42.6
1855 Male, age 76, left hemisphere 41.2
2529 Female, age 94, left hemisphere 38.1
2148 Female, age 91, left hemisphere 37.9
1911 Female, age 85, right hemisphere 36.6
Dentate gyrus
nTPM: 39.1
2010 Male, age 76, both hemispheres 44.5
2530 Female, age 94, left hemisphere 40.8
1927 Female, age 91, both hemispheres 39.4
2528 Male, age 74, both hemispheres 38.8
2246 Female, age 85, both hemispheres 38.1
2531 Female, age 67, both hemispheres 32.7
Entorhinal gyrus
nTPM: 38.2
2117 Female, age 91, right hemisphere 42.7
1938 Female, age 85, left hemisphere 41.3
2764 Male, age 80, right hemisphere 39.1
1787 Male, age 76, left hemisphere 38.5
2613 Female, age 94, left hemisphere 34.7
2686 Male, age 75, right hemisphere 33.0
Hippocampus, CA1
nTPM: 40.3
2749 Male, age 80, left hemisphere 44.6
2045 Male, age 76, both hemispheres 41.7
1873 Female, age 85, both hemispheres 41.0
2527 Male, age 74, both hemispheres 40.9
2082 Female, age 91, right hemisphere 33.4
Hippocampus, CA2
nTPM: 40.1
1963 Male, age 80, left hemisphere 44.3
1892 Male, age 76, both hemispheres 43.5
2249 Male, age 74, both hemispheres 43.0
2437 Female, age 94, left hemisphere 38.0
1940 Female, age 85, left hemisphere 36.8
2113 Female, age 91, right hemisphere 35.2
Hippocampus, CA3
nTPM: 37.6
2436 Male, age 74, both hemispheres 40.2
1867 Male, age 76, both hemispheres 39.9
1891 Female, age 85, both hemispheres 39.2
2137 Male, age 80, left hemisphere 36.1
2620 Female, age 94, left hemisphere 36.0
2861 Female, age 67, both hemispheres 34.4
Parahippocampal cortex
nTPM: 37.9
1850 Male, age 80, both hemispheres 41.4
1933 Female, age 85, both hemispheres 40.0
2532 Female, age 72, left hemisphere 40.0
2250 Female, age 67, right hemisphere 38.3
1990 Female, age 91, right hemisphere 37.2
2018 Male, age 76, both hemispheres 37.1
2245 Female, age 91, both hemispheres 36.9
2692 Male, age 74, both hemispheres 36.5
2693 Female, age 94, both hemispheres 36.4
2622 Female, age 67, right hemisphere 35.1
Perirhinal gyrus
nTPM: 39.3
1847 Female, age 91, left hemisphere 40.8
2521 Female, age 94, right hemisphere 40.3
1794 Male, age 80, right hemisphere 39.4
1841 Female, age 85, right hemisphere 39.4
2848 Male, age 76, right hemisphere 36.4
Subiculum
nTPM: 38.3
1977 Female, age 85, both hemispheres 39.5
2438 Female, age 94, left hemisphere 39.2
2619 Male, age 74, both hemispheres 38.3
1901 Male, age 80, both hemispheres 38.2
2042 Male, age 76, both hemispheres 37.8
2729 Female, age 91, right hemisphere 36.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.4
Samples: 197

Max nTPM: 70.4
Min nTPM: 27.4
Std nTPM: 7.8
Median nTPM: 43.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 70.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 66.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 62.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 62.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 61.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 59.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 59.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 58.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 57.7
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 57.6
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 55.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.0
FF:10169-103B7 60 years, female 120.3
FF:10153-102I9 76 years, female 75.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 28.6
Min nTPM: 22.9
Sample A Female 28.6
Sample B Female 25.9
Sample C Male 25.3
Sample D Male 22.9
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 30.4
Min nTPM: 21.4
Sample A Female 23.1
Sample B Female 30.4
Sample C Male 27.9
Sample D Male 21.4
Subiculum
nTPM: 25.2
Samples: 4

Max nTPM: 28.1
Min nTPM: 23.2
Sample A Female 28.1
Sample B Female 25.4
Sample C Male 24.1
Sample D Male 23.2
Ventral hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 28.6
Min nTPM: 22.0
Sample A Female 22.9
Sample B Female 22.0
Sample C Male 28.6
Sample D Male 23.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 26.6
Min nTPM: 24.1
Sample A Male 25.7
Sample B Male 24.1
Sample C Female 25.4
Sample D Female 26.6
Hippocampal formation
nTPM: 23.2
Samples: 4

Max nTPM: 24.6
Min nTPM: 22.0
Sample A Male 24.6
Sample B Male 22.8
Sample C Female 22.0
Sample D Female 23.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69549651 Antisense, RP_050315_01_C02, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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