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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:43.1 nTPM
HPA:43.1 nTPM
GTEx:41.0 nTPM
FANTOM5:45.5 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:36.1 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041872Antibody HPA046744
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.1
Sample id Sample description nTPM
Hippocampus
nTPM: 43.0
1898 Male, age 80, left hemisphere 45.0
2148 Female, age 91, left hemisphere 43.7
2621 Female, age 67, right hemisphere 43.1
2529 Female, age 94, left hemisphere 43.0
1855 Male, age 76, left hemisphere 42.3
1911 Female, age 85, right hemisphere 40.9
Dentate gyrus
nTPM: 43.0
2530 Female, age 94, left hemisphere 45.1
2010 Male, age 76, both hemispheres 43.9
2528 Male, age 74, both hemispheres 43.5
1927 Female, age 91, both hemispheres 43.1
2531 Female, age 67, both hemispheres 41.8
2246 Female, age 85, both hemispheres 40.6
Entorhinal gyrus
nTPM: 41.6
2117 Female, age 91, right hemisphere 43.8
2764 Male, age 80, right hemisphere 42.4
1787 Male, age 76, left hemisphere 42.3
1938 Female, age 85, left hemisphere 41.7
2613 Female, age 94, left hemisphere 40.7
2686 Male, age 75, right hemisphere 39.0
Hippocampus, CA1
nTPM: 43.1
2749 Male, age 80, left hemisphere 46.7
2045 Male, age 76, both hemispheres 44.0
1873 Female, age 85, both hemispheres 42.8
2527 Male, age 74, both hemispheres 41.2
2082 Female, age 91, right hemisphere 40.7
Hippocampus, CA2
nTPM: 42.9
1892 Male, age 76, both hemispheres 45.6
1963 Male, age 80, left hemisphere 44.4
2249 Male, age 74, both hemispheres 42.6
2437 Female, age 94, left hemisphere 42.5
2113 Female, age 91, right hemisphere 42.0
1940 Female, age 85, left hemisphere 40.3
Hippocampus, CA3
nTPM: 42.8
1867 Male, age 76, both hemispheres 44.0
2137 Male, age 80, left hemisphere 44.0
2620 Female, age 94, left hemisphere 43.4
1891 Female, age 85, both hemispheres 42.2
2436 Male, age 74, both hemispheres 41.9
2861 Female, age 67, both hemispheres 41.5
Parahippocampal cortex
nTPM: 41.0
2250 Female, age 67, right hemisphere 43.9
2245 Female, age 91, both hemispheres 42.6
1990 Female, age 91, right hemisphere 42.1
2018 Male, age 76, both hemispheres 42.0
1933 Female, age 85, both hemispheres 41.4
2532 Female, age 72, left hemisphere 41.1
1850 Male, age 80, both hemispheres 41.0
2692 Male, age 74, both hemispheres 39.6
2693 Female, age 94, both hemispheres 38.6
2622 Female, age 67, right hemisphere 37.6
Perirhinal gyrus
nTPM: 41.4
1847 Female, age 91, left hemisphere 42.1
1841 Female, age 85, right hemisphere 41.8
1794 Male, age 80, right hemisphere 41.6
2848 Male, age 76, right hemisphere 41.0
2521 Female, age 94, right hemisphere 40.4
Subiculum
nTPM: 41.6
1977 Female, age 85, both hemispheres 42.9
2042 Male, age 76, both hemispheres 42.3
1901 Male, age 80, both hemispheres 42.1
2438 Female, age 94, left hemisphere 41.8
2619 Male, age 74, both hemispheres 40.4
2729 Female, age 91, right hemisphere 40.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.0
Samples: 197

Max nTPM: 117.0
Min nTPM: 24.3
Std nTPM: 9.5
Median nTPM: 40.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 117.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 72.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 66.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 64.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 61.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 56.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 56.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 56.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 56.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 56.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 55.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.5
FF:10169-103B7 60 years, female 49.1
FF:10153-102I9 76 years, female 41.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 22.2
Min nTPM: 11.6
Sample A Female 22.2
Sample B Female 15.0
Sample C Male 15.0
Sample D Male 11.6
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 17.2
Min nTPM: 10.2
Sample A Female 12.8
Sample B Female 17.2
Sample C Male 14.1
Sample D Male 10.2
Subiculum
nTPM: 12.6
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.0
Sample A Female 15.3
Sample B Female 12.1
Sample C Male 11.0
Sample D Male 12.1
Ventral hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.5
Sample A Female 14.3
Sample B Female 10.5
Sample C Male 15.0
Sample D Male 14.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.4
Samples: 4

Max nTPM: 36.1
Min nTPM: 32.1
Sample A Male 32.1
Sample B Male 36.1
Sample C Female 34.4
Sample D Female 34.9
Hippocampal formation
nTPM: 36.1
Samples: 4

Max nTPM: 38.6
Min nTPM: 32.6
Sample A Male 35.3
Sample B Male 32.6
Sample C Female 38.0
Sample D Female 38.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
71280994 Antisense, RP_050818_02_A04, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

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