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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:34.7 nTPM
HPA:34.7 nTPM
GTEx:15.9 nTPM
FANTOM5:106.0 Scaled Tags Per Million
Pig:49.6 nTPM
Mouse:12.0 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004817Antibody HPA061417Antibody CAB013460
Glial cells Not detectedMediumNot detected
Neuronal cells MediumHighNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 23.5
2621 Female, age 67, right hemisphere 27.8
1898 Male, age 80, left hemisphere 26.2
1911 Female, age 85, right hemisphere 24.1
1855 Male, age 76, left hemisphere 21.3
2148 Female, age 91, left hemisphere 21.3
2529 Female, age 94, left hemisphere 20.2
Dentate gyrus
nTPM: 23.4
2531 Female, age 67, both hemispheres 33.6
1927 Female, age 91, both hemispheres 25.9
2010 Male, age 76, both hemispheres 25.0
2530 Female, age 94, left hemisphere 22.2
2528 Male, age 74, both hemispheres 17.4
2246 Female, age 85, both hemispheres 16.3
Entorhinal gyrus
nTPM: 20.6
2117 Female, age 91, right hemisphere 23.5
2686 Male, age 75, right hemisphere 23.4
2764 Male, age 80, right hemisphere 22.4
1938 Female, age 85, left hemisphere 20.5
1787 Male, age 76, left hemisphere 20.4
2613 Female, age 94, left hemisphere 13.3
Hippocampus, CA1
nTPM: 31.7
2749 Male, age 80, left hemisphere 73.1
2045 Male, age 76, both hemispheres 32.1
1873 Female, age 85, both hemispheres 21.9
2527 Male, age 74, both hemispheres 19.8
2082 Female, age 91, right hemisphere 11.8
Hippocampus, CA2
nTPM: 19.9
1963 Male, age 80, left hemisphere 29.2
1892 Male, age 76, both hemispheres 25.6
2437 Female, age 94, left hemisphere 22.0
2249 Male, age 74, both hemispheres 16.6
2113 Female, age 91, right hemisphere 14.7
1940 Female, age 85, left hemisphere 11.4
Hippocampus, CA3
nTPM: 34.7
2137 Male, age 80, left hemisphere 63.8
2861 Female, age 67, both hemispheres 41.3
1867 Male, age 76, both hemispheres 31.5
2620 Female, age 94, left hemisphere 27.1
1891 Female, age 85, both hemispheres 25.8
2436 Male, age 74, both hemispheres 18.9
Parahippocampal cortex
nTPM: 19.5
2245 Female, age 91, both hemispheres 24.1
1933 Female, age 85, both hemispheres 23.8
2250 Female, age 67, right hemisphere 23.3
2622 Female, age 67, right hemisphere 20.5
2532 Female, age 72, left hemisphere 19.6
2018 Male, age 76, both hemispheres 19.5
2693 Female, age 94, both hemispheres 17.6
1990 Female, age 91, right hemisphere 16.9
1850 Male, age 80, both hemispheres 15.2
2692 Male, age 74, both hemispheres 14.4
Perirhinal gyrus
nTPM: 17.8
1847 Female, age 91, left hemisphere 20.4
1841 Female, age 85, right hemisphere 19.3
2848 Male, age 76, right hemisphere 19.0
1794 Male, age 80, right hemisphere 15.8
2521 Female, age 94, right hemisphere 14.3
Subiculum
nTPM: 23.4
1901 Male, age 80, both hemispheres 33.2
1977 Female, age 85, both hemispheres 27.0
2042 Male, age 76, both hemispheres 23.2
2619 Male, age 74, both hemispheres 20.0
2438 Female, age 94, left hemisphere 19.4
2729 Female, age 91, right hemisphere 17.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 52.0
Min nTPM: 2.4
Std nTPM: 10.1
Median nTPM: 12.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 52.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 50.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 50.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 49.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 42.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 42.3
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 42.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 42.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 41.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 40.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 38.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 106.0
FF:10169-103B7 60 years, female 134.9
FF:10153-102I9 76 years, female 77.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.8
Samples: 4

Max nTPM: 54.2
Min nTPM: 29.0
Sample A Female 40.8
Sample B Female 39.0
Sample C Male 54.2
Sample D Male 29.0
Entorhinal cortex
nTPM: 34.7
Samples: 4

Max nTPM: 38.0
Min nTPM: 30.6
Sample A Female 36.0
Sample B Female 30.6
Sample C Male 34.0
Sample D Male 38.0
Subiculum
nTPM: 30.6
Samples: 4

Max nTPM: 47.3
Min nTPM: 19.8
Sample A Female 34.7
Sample B Female 19.8
Sample C Male 47.3
Sample D Male 20.5
Ventral hippocampus
nTPM: 49.6
Samples: 4

Max nTPM: 72.9
Min nTPM: 31.5
Sample A Female 43.1
Sample B Female 31.5
Sample C Male 72.9
Sample D Male 51.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 13.5
Min nTPM: 10.7
Sample A Male 10.7
Sample B Male 12.2
Sample C Female 11.8
Sample D Female 13.5
Hippocampal formation
nTPM: 10.3
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.2
Sample A Male 8.2
Sample B Male 11.8
Sample C Female 10.1
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
1720 Antisense, RP_Baylor_102791, Mouse strain C57BL/6J (56 days, male) 2.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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