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TPD52
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:42.9 nTPM
HPA:42.9 nTPM
GTEx:60.9 nTPM
FANTOM5:77.2 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028427Antibody HPA062167
Glial cells LowHigh
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.9
Sample id Sample description nTPM
Hippocampus
nTPM: 36.3
1898 Male, age 80, left hemisphere 47.0
1855 Male, age 76, left hemisphere 38.0
2621 Female, age 67, right hemisphere 36.8
2148 Female, age 91, left hemisphere 35.1
1911 Female, age 85, right hemisphere 34.6
2529 Female, age 94, left hemisphere 26.1
Dentate gyrus
nTPM: 42.9
1927 Female, age 91, both hemispheres 58.4
2530 Female, age 94, left hemisphere 46.1
2010 Male, age 76, both hemispheres 42.0
2246 Female, age 85, both hemispheres 41.4
2531 Female, age 67, both hemispheres 38.7
2528 Male, age 74, both hemispheres 31.0
Entorhinal gyrus
nTPM: 30.8
1938 Female, age 85, left hemisphere 37.5
2764 Male, age 80, right hemisphere 31.3
2613 Female, age 94, left hemisphere 30.8
1787 Male, age 76, left hemisphere 29.8
2686 Male, age 75, right hemisphere 29.8
2117 Female, age 91, right hemisphere 25.5
Hippocampus, CA1
nTPM: 42.7
2749 Male, age 80, left hemisphere 55.1
1873 Female, age 85, both hemispheres 55.0
2045 Male, age 76, both hemispheres 50.8
2527 Male, age 74, both hemispheres 28.1
2082 Female, age 91, right hemisphere 24.3
Hippocampus, CA2
nTPM: 40.5
1892 Male, age 76, both hemispheres 57.5
1963 Male, age 80, left hemisphere 52.7
1940 Female, age 85, left hemisphere 41.3
2437 Female, age 94, left hemisphere 36.1
2249 Male, age 74, both hemispheres 29.7
2113 Female, age 91, right hemisphere 25.6
Hippocampus, CA3
nTPM: 41.9
2137 Male, age 80, left hemisphere 48.3
2620 Female, age 94, left hemisphere 46.6
1867 Male, age 76, both hemispheres 45.2
1891 Female, age 85, both hemispheres 38.7
2436 Male, age 74, both hemispheres 37.9
2861 Female, age 67, both hemispheres 34.6
Parahippocampal cortex
nTPM: 33.8
1850 Male, age 80, both hemispheres 43.4
2693 Female, age 94, both hemispheres 37.6
1933 Female, age 85, both hemispheres 37.0
2532 Female, age 72, left hemisphere 34.7
2245 Female, age 91, both hemispheres 33.8
1990 Female, age 91, right hemisphere 33.3
2250 Female, age 67, right hemisphere 32.2
2018 Male, age 76, both hemispheres 30.5
2692 Male, age 74, both hemispheres 28.4
2622 Female, age 67, right hemisphere 27.3
Perirhinal gyrus
nTPM: 42.4
1841 Female, age 85, right hemisphere 49.2
1794 Male, age 80, right hemisphere 45.8
2521 Female, age 94, right hemisphere 42.1
1847 Female, age 91, left hemisphere 40.0
2848 Male, age 76, right hemisphere 35.1
Subiculum
nTPM: 29.5
1901 Male, age 80, both hemispheres 35.3
1977 Female, age 85, both hemispheres 32.7
2438 Female, age 94, left hemisphere 31.0
2042 Male, age 76, both hemispheres 28.5
2729 Female, age 91, right hemisphere 25.2
2619 Male, age 74, both hemispheres 24.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.9
Samples: 197

Max nTPM: 140.7
Min nTPM: 19.9
Std nTPM: 22.8
Median nTPM: 58.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 140.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 137.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 131.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 123.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 114.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 114.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 110.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 109.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 108.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 104.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 104.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.2
FF:10169-103B7 60 years, female 80.5
FF:10153-102I9 76 years, female 73.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.