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NT5C2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:25.2 nTPM
HPA:25.2 nTPM
GTEx:26.2 nTPM
FANTOM5:40.4 Scaled Tags Per Million
Pig:35.2 nTPM
Mouse:16.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003751
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.2
Sample id Sample description nTPM
Hippocampus
nTPM: 24.5
1855 Male, age 76, left hemisphere 27.4
1898 Male, age 80, left hemisphere 25.8
2529 Female, age 94, left hemisphere 24.9
2621 Female, age 67, right hemisphere 23.9
1911 Female, age 85, right hemisphere 22.9
2148 Female, age 91, left hemisphere 22.0
Dentate gyrus
nTPM: 24.4
1927 Female, age 91, both hemispheres 25.9
2528 Male, age 74, both hemispheres 25.8
2010 Male, age 76, both hemispheres 25.6
2246 Female, age 85, both hemispheres 24.4
2531 Female, age 67, both hemispheres 22.9
2530 Female, age 94, left hemisphere 22.0
Entorhinal gyrus
nTPM: 24.6
1938 Female, age 85, left hemisphere 29.4
2686 Male, age 75, right hemisphere 25.7
1787 Male, age 76, left hemisphere 24.0
2764 Male, age 80, right hemisphere 24.0
2117 Female, age 91, right hemisphere 23.1
2613 Female, age 94, left hemisphere 21.3
Hippocampus, CA1
nTPM: 24.0
1873 Female, age 85, both hemispheres 25.1
2749 Male, age 80, left hemisphere 24.4
2527 Male, age 74, both hemispheres 23.9
2045 Male, age 76, both hemispheres 23.3
2082 Female, age 91, right hemisphere 23.1
Hippocampus, CA2
nTPM: 24.8
1892 Male, age 76, both hemispheres 28.2
2249 Male, age 74, both hemispheres 26.8
1940 Female, age 85, left hemisphere 24.4
2113 Female, age 91, right hemisphere 24.1
1963 Male, age 80, left hemisphere 23.1
2437 Female, age 94, left hemisphere 22.1
Hippocampus, CA3
nTPM: 24.6
2436 Male, age 74, both hemispheres 28.1
2137 Male, age 80, left hemisphere 26.3
2861 Female, age 67, both hemispheres 25.7
1867 Male, age 76, both hemispheres 23.8
1891 Female, age 85, both hemispheres 22.3
2620 Female, age 94, left hemisphere 21.6
Parahippocampal cortex
nTPM: 24.2
1850 Male, age 80, both hemispheres 27.7
1933 Female, age 85, both hemispheres 25.5
2622 Female, age 67, right hemisphere 25.2
2692 Male, age 74, both hemispheres 24.7
2532 Female, age 72, left hemisphere 24.4
2018 Male, age 76, both hemispheres 24.3
2245 Female, age 91, both hemispheres 23.2
2250 Female, age 67, right hemisphere 22.8
2693 Female, age 94, both hemispheres 22.3
1990 Female, age 91, right hemisphere 22.2
Perirhinal gyrus
nTPM: 24.8
1847 Female, age 91, left hemisphere 26.2
1794 Male, age 80, right hemisphere 25.6
2848 Male, age 76, right hemisphere 24.4
2521 Female, age 94, right hemisphere 24.1
1841 Female, age 85, right hemisphere 23.6
Subiculum
nTPM: 25.2
1977 Female, age 85, both hemispheres 27.1
2729 Female, age 91, right hemisphere 25.9
2619 Male, age 74, both hemispheres 25.2
2042 Male, age 76, both hemispheres 24.7
1901 Male, age 80, both hemispheres 24.6
2438 Female, age 94, left hemisphere 24.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.2
Samples: 197

Max nTPM: 51.6
Min nTPM: 13.6
Std nTPM: 4.5
Median nTPM: 26.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 51.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 38.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 36.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 36.1
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 35.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 34.3
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 34.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 33.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 33.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 33.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 33.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.4
FF:10169-103B7 60 years, female 50.2
FF:10153-102I9 76 years, female 30.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.3
Samples: 4

Max nTPM: 31.4
Min nTPM: 24.0
Sample A Female 24.0
Sample B Female 29.7
Sample C Male 28.0
Sample D Male 31.4
Entorhinal cortex
nTPM: 35.2
Samples: 4

Max nTPM: 39.5
Min nTPM: 31.9
Sample A Female 33.6
Sample B Female 39.5
Sample C Male 31.9
Sample D Male 35.8
Subiculum
nTPM: 30.2
Samples: 4

Max nTPM: 30.9
Min nTPM: 28.4
Sample A Female 28.4
Sample B Female 30.6
Sample C Male 30.8
Sample D Male 30.9
Ventral hippocampus
nTPM: 29.6
Samples: 4

Max nTPM: 31.7
Min nTPM: 27.5
Sample A Female 27.5
Sample B Female 31.7
Sample C Male 28.4
Sample D Male 30.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 17.1
Min nTPM: 16.3
Sample A Male 17.0
Sample B Male 17.1
Sample C Female 16.6
Sample D Female 16.3
Hippocampal formation
nTPM: 15.6
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.7
Sample A Male 16.0
Sample B Male 17.1
Sample C Female 15.5
Sample D Female 13.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69134634 Antisense, RP_050321_03_C01, Mouse strain C57BL/6J (56 days, male) 0.1

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