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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.4 nTPM
HPA:35.4 nTPM
GTEx:30.2 nTPM
FANTOM5:72.8 Scaled Tags Per Million
Pig:31.5 nTPM
Mouse:70.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005719
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.4
Sample id Sample description nTPM
Hippocampus
nTPM: 28.1
1911 Female, age 85, right hemisphere 33.0
2148 Female, age 91, left hemisphere 32.7
1898 Male, age 80, left hemisphere 28.9
1855 Male, age 76, left hemisphere 27.4
2621 Female, age 67, right hemisphere 24.0
2529 Female, age 94, left hemisphere 22.4
Dentate gyrus
nTPM: 26.2
1927 Female, age 91, both hemispheres 38.8
2531 Female, age 67, both hemispheres 31.6
2010 Male, age 76, both hemispheres 27.0
2528 Male, age 74, both hemispheres 21.6
2530 Female, age 94, left hemisphere 19.3
2246 Female, age 85, both hemispheres 18.9
Entorhinal gyrus
nTPM: 30.2
2613 Female, age 94, left hemisphere 38.7
1938 Female, age 85, left hemisphere 38.0
2686 Male, age 75, right hemisphere 29.3
1787 Male, age 76, left hemisphere 25.9
2117 Female, age 91, right hemisphere 24.7
2764 Male, age 80, right hemisphere 24.4
Hippocampus, CA1
nTPM: 30.1
1873 Female, age 85, both hemispheres 37.5
2045 Male, age 76, both hemispheres 31.2
2749 Male, age 80, left hemisphere 30.8
2082 Female, age 91, right hemisphere 27.3
2527 Male, age 74, both hemispheres 23.7
Hippocampus, CA2
nTPM: 28.0
1892 Male, age 76, both hemispheres 32.7
1940 Female, age 85, left hemisphere 30.4
2113 Female, age 91, right hemisphere 28.8
2437 Female, age 94, left hemisphere 28.5
1963 Male, age 80, left hemisphere 25.3
2249 Male, age 74, both hemispheres 22.4
Hippocampus, CA3
nTPM: 33.3
2620 Female, age 94, left hemisphere 44.2
2137 Male, age 80, left hemisphere 35.1
2436 Male, age 74, both hemispheres 34.0
1891 Female, age 85, both hemispheres 32.9
1867 Male, age 76, both hemispheres 26.9
2861 Female, age 67, both hemispheres 26.7
Parahippocampal cortex
nTPM: 33.8
1850 Male, age 80, both hemispheres 43.1
2622 Female, age 67, right hemisphere 40.8
1933 Female, age 85, both hemispheres 40.1
2693 Female, age 94, both hemispheres 37.9
2692 Male, age 74, both hemispheres 32.6
2245 Female, age 91, both hemispheres 31.8
2250 Female, age 67, right hemisphere 30.7
1990 Female, age 91, right hemisphere 29.7
2532 Female, age 72, left hemisphere 28.5
2018 Male, age 76, both hemispheres 22.3
Perirhinal gyrus
nTPM: 35.4
1841 Female, age 85, right hemisphere 47.8
1847 Female, age 91, left hemisphere 37.0
1794 Male, age 80, right hemisphere 32.1
2848 Male, age 76, right hemisphere 31.4
2521 Female, age 94, right hemisphere 28.8
Subiculum
nTPM: 30.1
2438 Female, age 94, left hemisphere 49.3
1901 Male, age 80, both hemispheres 36.9
1977 Female, age 85, both hemispheres 26.2
2619 Male, age 74, both hemispheres 24.6
2729 Female, age 91, right hemisphere 23.6
2042 Male, age 76, both hemispheres 20.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.2
Samples: 197

Max nTPM: 51.9
Min nTPM: 16.8
Std nTPM: 6.6
Median nTPM: 29.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 51.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 50.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 47.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 45.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 45.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 44.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 44.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 44.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 44.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 43.0
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 42.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.8
FF:10169-103B7 60 years, female 84.7
FF:10153-102I9 76 years, female 60.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.5
Samples: 4

Max nTPM: 36.0
Min nTPM: 27.5
Sample A Female 36.0
Sample B Female 33.3
Sample C Male 29.1
Sample D Male 27.5
Entorhinal cortex
nTPM: 28.3
Samples: 4

Max nTPM: 32.4
Min nTPM: 24.9
Sample A Female 29.5
Sample B Female 32.4
Sample C Male 26.3
Sample D Male 24.9
Subiculum
nTPM: 25.9
Samples: 4

Max nTPM: 31.7
Min nTPM: 22.7
Sample A Female 31.7
Sample B Female 22.7
Sample C Male 23.7
Sample D Male 25.3
Ventral hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 30.4
Min nTPM: 21.3
Sample A Female 28.7
Sample B Female 22.8
Sample C Male 21.3
Sample D Male 30.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.7
Samples: 4

Max nTPM: 68.9
Min nTPM: 65.4
Sample A Male 65.9
Sample B Male 68.9
Sample C Female 66.5
Sample D Female 65.4
Hippocampal formation
nTPM: 70.6
Samples: 4

Max nTPM: 72.8
Min nTPM: 68.3
Sample A Male 68.9
Sample B Male 72.3
Sample C Female 72.8
Sample D Female 68.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.