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UBE2A
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:29.6 nTPM
HPA:29.6 nTPM
GTEx:32.6 nTPM
FANTOM5:69.5 Scaled Tags Per Million
Pig:33.5 nTPM
Mouse:65.9 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.6
Sample id Sample description nTPM
Hippocampus
nTPM: 29.6
1855 Male, age 76, left hemisphere 31.8
1898 Male, age 80, left hemisphere 30.5
2621 Female, age 67, right hemisphere 30.3
2529 Female, age 94, left hemisphere 29.6
1911 Female, age 85, right hemisphere 28.6
2148 Female, age 91, left hemisphere 26.5
Dentate gyrus
nTPM: 28.2
2246 Female, age 85, both hemispheres 30.5
2010 Male, age 76, both hemispheres 30.3
2530 Female, age 94, left hemisphere 28.7
2528 Male, age 74, both hemispheres 27.9
1927 Female, age 91, both hemispheres 26.8
2531 Female, age 67, both hemispheres 24.9
Entorhinal gyrus
nTPM: 27.4
1938 Female, age 85, left hemisphere 29.3
2117 Female, age 91, right hemisphere 29.2
2764 Male, age 80, right hemisphere 27.6
1787 Male, age 76, left hemisphere 27.0
2613 Female, age 94, left hemisphere 26.2
2686 Male, age 75, right hemisphere 24.9
Hippocampus, CA1
nTPM: 29.6
2749 Male, age 80, left hemisphere 33.0
2045 Male, age 76, both hemispheres 30.5
2527 Male, age 74, both hemispheres 30.4
1873 Female, age 85, both hemispheres 27.9
2082 Female, age 91, right hemisphere 26.2
Hippocampus, CA2
nTPM: 27.8
2249 Male, age 74, both hemispheres 30.2
1892 Male, age 76, both hemispheres 28.9
2437 Female, age 94, left hemisphere 28.1
1940 Female, age 85, left hemisphere 27.7
1963 Male, age 80, left hemisphere 27.2
2113 Female, age 91, right hemisphere 25.0
Hippocampus, CA3
nTPM: 28.0
2137 Male, age 80, left hemisphere 29.8
2436 Male, age 74, both hemispheres 29.4
1867 Male, age 76, both hemispheres 29.0
2620 Female, age 94, left hemisphere 28.0
1891 Female, age 85, both hemispheres 27.2
2861 Female, age 67, both hemispheres 24.7
Parahippocampal cortex
nTPM: 28.3
2245 Female, age 91, both hemispheres 30.0
2250 Female, age 67, right hemisphere 29.0
2018 Male, age 76, both hemispheres 28.8
1850 Male, age 80, both hemispheres 28.7
2692 Male, age 74, both hemispheres 28.5
1933 Female, age 85, both hemispheres 28.1
2532 Female, age 72, left hemisphere 28.0
2693 Female, age 94, both hemispheres 27.8
1990 Female, age 91, right hemisphere 27.2
2622 Female, age 67, right hemisphere 27.2
Perirhinal gyrus
nTPM: 28.8
1794 Male, age 80, right hemisphere 30.5
1847 Female, age 91, left hemisphere 29.3
1841 Female, age 85, right hemisphere 28.8
2521 Female, age 94, right hemisphere 28.5
2848 Male, age 76, right hemisphere 27.0
Subiculum
nTPM: 28.9
2042 Male, age 76, both hemispheres 32.2
1901 Male, age 80, both hemispheres 29.3
2619 Male, age 74, both hemispheres 29.0
1977 Female, age 85, both hemispheres 28.3
2729 Female, age 91, right hemisphere 27.4
2438 Female, age 94, left hemisphere 27.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.6
Samples: 197

Max nTPM: 56.1
Min nTPM: 21.3
Std nTPM: 5.4
Median nTPM: 31.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 56.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 48.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 47.5
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 46.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 45.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 44.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 44.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 44.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 43.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 43.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 42.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.5
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 66.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 42.6
Min nTPM: 27.6
Sample A Female 42.6
Sample B Female 32.7
Sample C Male 31.1
Sample D Male 27.6
Entorhinal cortex
nTPM: 27.9
Samples: 4

Max nTPM: 31.5
Min nTPM: 23.6
Sample A Female 29.5
Sample B Female 31.5
Sample C Male 27.1
Sample D Male 23.6
Subiculum
nTPM: 28.2
Samples: 4

Max nTPM: 36.3
Min nTPM: 24.8
Sample A Female 36.3
Sample B Female 25.3
Sample C Male 24.8
Sample D Male 26.5
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 31.4
Min nTPM: 21.4
Sample A Female 29.4
Sample B Female 21.4
Sample C Male 27.4
Sample D Male 31.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.2
Samples: 4

Max nTPM: 59.2
Min nTPM: 52.6
Sample A Male 52.6
Sample B Male 54.2
Sample C Female 58.8
Sample D Female 59.2
Hippocampal formation
nTPM: 65.9
Samples: 4

Max nTPM: 78.8
Min nTPM: 59.6
Sample A Male 78.8
Sample B Male 59.6
Sample C Female 64.7
Sample D Female 60.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
68563019 Antisense, RP_050120_02_H12, Mouse strain C57BL/6J (56 days, male) 3.0

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