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SENP1
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.9 nTPM
HPA:3.9 nTPM
GTEx:1.7 nTPM
FANTOM5:12.5 Scaled Tags Per Million
Pig:5.5 nTPM
Mouse:4.3 nTPM
Allen mouse:0.0 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 3.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 3.0
2288 Male, age 75, left hemisphere 3.7
1857 Female, age 85, left hemisphere 3.5
2481 Female, age 94, left hemisphere 3.5
2846 Female, age 79, unknown 3.1
1781 Male, age 74, unknown 3.0
1854 Male, age 80, left hemisphere 2.8
2290 Female, age 72, unknown 2.6
2289 Male, age 61, right hemisphere 1.9
Claustrum
nTPM: 2.5
1956 Male, age 74, unknown 3.1
2196 Female, age 79, unknown 3.1
2292 Female, age 85, both hemispheres 2.9
2392 Female, age 94, both hemispheres 2.5
2198 Male, age 80, both hemispheres 2.4
2491 Male, age 75, both hemispheres 2.4
2568 Male, age 61, both hemispheres 2.1
2284 Female, age 91, both hemispheres 2.0
2645 Female, age 72, unknown 1.7
Globus pallidus, externus
nTPM: 2.9
2567 Female, age 72, unknown 3.9
2395 Male, age 75, both hemispheres 3.0
1996 Male, age 80, right hemisphere 2.9
2772 Female, age 79, unknown 2.6
2646 Male, age 61, right hemisphere 1.9
Globus pallidus, internus
nTPM: 3.9
2111 Female, age 85, right hemisphere 4.5
2778 Female, age 91, both hemispheres 4.5
2287 Male, age 75, right hemisphere 4.3
2566 Female, age 72, unknown 4.2
2037 Male, age 80, right hemisphere 3.9
1818 Male, age 74, unknown 3.4
2483 Female, age 94, right hemisphere 2.7
Nucleus accumbens
nTPM: 3.2
2391 Female, age 94, left hemisphere 4.3
2698 Female, age 72, unknown 3.7
2824 Male, age 61, right hemisphere 3.5
1806 Female, age 85, left hemisphere 3.2
1856 Female, age 91, right hemisphere 3.0
2732 Male, age 80, right hemisphere 3.0
1783 Male, age 74, unknown 2.5
2286 Male, age 75, left hemisphere 2.3
Nucleus basalis of Meynert
nTPM: 2.4
2393 Male, age 80, right hemisphere 3.1
2821 Male, age 75, both hemispheres 2.8
2484 Female, age 94, left hemisphere 2.1
2569 Male, age 61, both hemispheres 1.7
Nucleus of the diagonal band
nTPM: 2.5
1979 Male, age 74, unknown 3.7
2775 Male, age 80, right hemisphere 3.2
1812 Female, age 91, both hemispheres 2.2
2195 Female, age 85, both hemispheres 2.0
2029 Male, age 61, right hemisphere 1.6
Olfactory tubercle
nTPM: 2.2
2856 Male, age 75, right hemisphere 2.7
1846 Male, age 80, right hemisphere 2.4
2487 Female, age 94, left hemisphere 2.1
1998 Female, age 91, both hemispheres 1.6
Putamen
nTPM: 2.7
2482 Female, age 94, left hemisphere 3.5
1829 Male, age 74, unknown 3.3
1937 Female, age 91, right hemisphere 2.9
2466 Female, age 79, unknown 2.5
1838 Male, age 80, right hemisphere 2.4
2489 Female, age 72, unknown 2.3
2647 Male, age 75, left hemisphere 2.1
Septal nuclei
nTPM: 2.3
2394 Male, age 61, left hemisphere 3.4
2199 Male, age 80, right hemisphere 3.2
2009 Female, age 91, both hemispheres 2.5
2629 Female, age 94, right hemisphere 2.4
2031 Female, age 72, unknown 2.0
2059 Female, age 85, both hemispheres 1.7
1960 Male, age 74, unknown 0.8

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 1.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1.7
Samples: 246

Max nTPM: 3.5
Min nTPM: 0.0
Std nTPM: 0.5
Median nTPM: 1.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 3.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 3.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 3.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 3.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 3.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 3.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 2.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 2.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 2.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 2.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1.7
Samples: 246

Max nTPM: 5.2
Min nTPM: 0.0
Std nTPM: 0.5
Median nTPM: 1.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 5.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 3.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 3.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 3.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 3.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 3.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 2.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 2.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 2.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 2.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 2.8
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Brain - Putamen (basal ganglia)
Average nTPM: 1.7
Samples: 205

Max nTPM: 3.4
Min nTPM: 0.5
Std nTPM: 0.5
Median nTPM: 1.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 3.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 3.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 3.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 3.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 3.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 3.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 2.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 2.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 2.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 2.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 2.7
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 11.2
FF:10164-103B2 76 years, female 11.2
Globus pallidus
Scaled Tags Per Million: 10.4
FF:10175-103C4 60 years, female 11.0
FF:10161-103A8 76 years, female 9.9
Nucleus accumbens
Scaled Tags Per Million: 12.5
FF:10037-101F1 23-56 years, mixed 12.5
Putamen
Scaled Tags Per Million: 11.8
FF:10176-103C5 60 years, female 11.8

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 5.5
Pig sample Sample description nTPM
Caudate
nTPM: 4.8
Samples: 4

Max nTPM: 5.2
Min nTPM: 4.6
Sample A Female 5.2
Sample B Female 4.7
Sample C Male 4.6
Sample D Male 4.7
Putamen
nTPM: 5.3
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.6
Sample A Female 6.2
Sample B Female 4.6
Sample C Male 5.1
Sample D Male 5.1
Septum
nTPM: 5.5
Samples: 4

Max nTPM: 5.9
Min nTPM: 5.3
Sample A Female 5.9
Sample B Female 5.3
Sample C Male 5.3
Sample D Male 5.4
Ventral pallidum
nTPM: 4.9
Samples: 4

Max nTPM: 5.2
Min nTPM: 4.7
Sample A Female 5.2
Sample B Female 5.0
Sample C Male 4.7
Sample D Male 4.8

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 4.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 3.3
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.7
Sample A Male 3.6
Sample B Male 2.7
Sample C Female 3.2
Sample D Female 3.6
Septum
nTPM: 4.3
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.9
Sample A Male 4.5
Sample B Male 4.2
Sample C Female 3.9
Sample D Female 4.5
Ventral forebrain
nTPM: 3.8
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.4
Sample A Male 3.5
Sample B Male 4.6
Sample C Female 3.6
Sample D Female 3.4

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
68196948 Antisense, RP_040916_02_E02, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
68196948 Antisense, RP_040916_02_E02, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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