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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		18.376
RNA expressioni
Consensus:14.5 nTPM
HPA:14.5 nTPM
GTEx:10.8 nTPM
FANTOM5:4.9 Scaled Tags Per Million
Pig:0.3 nTPM
Mouse:3.5 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006641Antibody CAB004005Antibody CAB062563Antibody CAB068232
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB044060
Hippocampal formation mean intensity 18.376
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 9.300
Molecular layer of the dentate gyrus 18.371
Granular dentate gyrus 9.038
CA1 - oriens layer 14.130
CA1 - pyramidal layer 7.224
CA1 - radiatum layer 10.180
CA2 - oriens layer 10.379
CA2 - pyramidal layer 6.089
CA2 - radiatum layer 10.005
CA3 - oriens layer 8.964
CA3 - pyramidal layer 5.798
CA3 - radiatum layer 7.351
Stratum lucidum 18.376
Lacunosum moleculare 10.982
Subiculum 4.308

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.5
Sample id Sample description nTPM
Hippocampus
nTPM: 5.7
2621 Female, age 67, right hemisphere 15.7
2148 Female, age 91, left hemisphere 6.8
1898 Male, age 80, left hemisphere 6.0
1855 Male, age 76, left hemisphere 3.8
1911 Female, age 85, right hemisphere 1.4
2529 Female, age 94, left hemisphere 0.4
Dentate gyrus
nTPM: 10.3
1927 Female, age 91, both hemispheres 38.9
2010 Male, age 76, both hemispheres 11.7
2530 Female, age 94, left hemisphere 7.3
2246 Female, age 85, both hemispheres 2.7
2531 Female, age 67, both hemispheres 0.7
2528 Male, age 74, both hemispheres 0.5
Entorhinal gyrus
nTPM: 0.4
2117 Female, age 91, right hemisphere 1.5
2613 Female, age 94, left hemisphere 0.3
2686 Male, age 75, right hemisphere 0.3
2764 Male, age 80, right hemisphere 0.2
1938 Female, age 85, left hemisphere 0.1
1787 Male, age 76, left hemisphere 0.0
Hippocampus, CA1
nTPM: 11.6
2749 Male, age 80, left hemisphere 36.6
1873 Female, age 85, both hemispheres 17.4
2527 Male, age 74, both hemispheres 2.5
2045 Male, age 76, both hemispheres 1.0
2082 Female, age 91, right hemisphere 0.3
Hippocampus, CA2
nTPM: 14.5
1963 Male, age 80, left hemisphere 56.5
1892 Male, age 76, both hemispheres 28.6
2249 Male, age 74, both hemispheres 1.0
2437 Female, age 94, left hemisphere 0.4
2113 Female, age 91, right hemisphere 0.2
1940 Female, age 85, left hemisphere 0.0
Hippocampus, CA3
nTPM: 0.9
2861 Female, age 67, both hemispheres 3.3
2436 Male, age 74, both hemispheres 0.7
1867 Male, age 76, both hemispheres 0.5
1891 Female, age 85, both hemispheres 0.5
2620 Female, age 94, left hemisphere 0.5
2137 Male, age 80, left hemisphere 0.2
Parahippocampal cortex
nTPM: 0.3
2250 Female, age 67, right hemisphere 0.5
2693 Female, age 94, both hemispheres 0.5
2245 Female, age 91, both hemispheres 0.3
2532 Female, age 72, left hemisphere 0.3
1850 Male, age 80, both hemispheres 0.2
1990 Female, age 91, right hemisphere 0.2
2692 Male, age 74, both hemispheres 0.2
1933 Female, age 85, both hemispheres 0.1
2018 Male, age 76, both hemispheres 0.1
2622 Female, age 67, right hemisphere 0.1
Perirhinal gyrus
nTPM: 0.3
2521 Female, age 94, right hemisphere 0.5
1794 Male, age 80, right hemisphere 0.3
1847 Female, age 91, left hemisphere 0.3
2848 Male, age 76, right hemisphere 0.3
1841 Female, age 85, right hemisphere 0.1
Subiculum
nTPM: 0.3
2729 Female, age 91, right hemisphere 1.0
2619 Male, age 74, both hemispheres 0.3
1901 Male, age 80, both hemispheres 0.2
1977 Female, age 85, both hemispheres 0.2
2438 Female, age 94, left hemisphere 0.2
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.8
Samples: 197

Max nTPM: 125.6
Min nTPM: 0.1
Std nTPM: 22.4
Median nTPM: 1.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 125.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 116.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 110.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 109.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 98.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 84.6
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 75.3
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 70.7
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 67.6
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 65.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 63.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.9
FF:10169-103B7 60 years, female 9.4
FF:10153-102I9 76 years, female 0.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.0
Entorhinal cortex
nTPM: 0.3
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.2
Sample A Female 0.2
Sample B Female 0.3
Sample C Male 0.2
Sample D Male 0.4
Subiculum
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.1
Sample A Female 0.4
Sample B Female 0.3
Sample C Male 0.1
Sample D Male 0.1
Ventral hippocampus
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.2
Sample A Male 0.6
Sample B Male 0.2
Sample C Female 0.5
Sample D Female 0.3
Hippocampal formation
nTPM: 3.5
Samples: 4

Max nTPM: 4.3
Min nTPM: 2.4
Sample A Male 3.9
Sample B Male 3.5
Sample C Female 4.3
Sample D Female 2.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
583549 Antisense, RP_040831_02_G06, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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