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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:31.4 nTPM
HPA:31.4 nTPM
GTEx:26.0 nTPM
FANTOM5:51.6 Scaled Tags Per Million
Pig:22.8 nTPM
Mouse:58.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024190Antibody HPA024637Antibody HPA046329Antibody CAB004666
Glial cells LowLowMediumNot detected
Neuronal cells Not detectedNot detectedNot detectedLow









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.4
Sample id Sample description nTPM
Hippocampus
nTPM: 31.4
2148 Female, age 91, left hemisphere 33.6
2529 Female, age 94, left hemisphere 32.8
1898 Male, age 80, left hemisphere 32.1
1911 Female, age 85, right hemisphere 30.3
2621 Female, age 67, right hemisphere 30.2
1855 Male, age 76, left hemisphere 29.7
Dentate gyrus
nTPM: 29.3
2528 Male, age 74, both hemispheres 32.8
1927 Female, age 91, both hemispheres 30.8
2010 Male, age 76, both hemispheres 30.3
2246 Female, age 85, both hemispheres 29.1
2530 Female, age 94, left hemisphere 27.1
2531 Female, age 67, both hemispheres 25.9
Entorhinal gyrus
nTPM: 28.7
2117 Female, age 91, right hemisphere 33.2
1938 Female, age 85, left hemisphere 30.1
1787 Male, age 76, left hemisphere 29.3
2686 Male, age 75, right hemisphere 28.2
2764 Male, age 80, right hemisphere 27.7
2613 Female, age 94, left hemisphere 24.1
Hippocampus, CA1
nTPM: 31.0
2527 Male, age 74, both hemispheres 36.0
1873 Female, age 85, both hemispheres 30.4
2082 Female, age 91, right hemisphere 30.4
2749 Male, age 80, left hemisphere 29.4
2045 Male, age 76, both hemispheres 28.6
Hippocampus, CA2
nTPM: 30.8
2249 Male, age 74, both hemispheres 36.7
2113 Female, age 91, right hemisphere 30.6
1892 Male, age 76, both hemispheres 30.3
1940 Female, age 85, left hemisphere 29.7
1963 Male, age 80, left hemisphere 29.3
2437 Female, age 94, left hemisphere 28.1
Hippocampus, CA3
nTPM: 30.8
2436 Male, age 74, both hemispheres 39.6
1867 Male, age 76, both hemispheres 30.8
1891 Female, age 85, both hemispheres 30.0
2620 Female, age 94, left hemisphere 28.2
2861 Female, age 67, both hemispheres 28.2
2137 Male, age 80, left hemisphere 28.0
Parahippocampal cortex
nTPM: 29.3
2250 Female, age 67, right hemisphere 32.0
2692 Male, age 74, both hemispheres 31.0
2622 Female, age 67, right hemisphere 30.2
1933 Female, age 85, both hemispheres 29.8
1990 Female, age 91, right hemisphere 29.8
2245 Female, age 91, both hemispheres 29.7
2018 Male, age 76, both hemispheres 29.1
1850 Male, age 80, both hemispheres 28.3
2693 Female, age 94, both hemispheres 27.5
2532 Female, age 72, left hemisphere 25.4
Perirhinal gyrus
nTPM: 29.2
1847 Female, age 91, left hemisphere 31.0
1794 Male, age 80, right hemisphere 30.4
1841 Female, age 85, right hemisphere 29.2
2521 Female, age 94, right hemisphere 29.0
2848 Male, age 76, right hemisphere 26.3
Subiculum
nTPM: 30.0
2729 Female, age 91, right hemisphere 33.9
2619 Male, age 74, both hemispheres 33.5
1977 Female, age 85, both hemispheres 29.1
1901 Male, age 80, both hemispheres 28.7
2438 Female, age 94, left hemisphere 28.4
2042 Male, age 76, both hemispheres 26.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.0
Samples: 197

Max nTPM: 49.8
Min nTPM: 11.0
Std nTPM: 7.9
Median nTPM: 25.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 49.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 48.0
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 47.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 47.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 47.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 46.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 46.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 45.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 43.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 42.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 40.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.6
FF:10153-102I9 76 years, female 62.4
FF:10169-103B7 60 years, female 40.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 18.8
Min nTPM: 16.4
Sample A Female 18.8
Sample B Female 17.1
Sample C Male 16.4
Sample D Male 16.6
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 25.6
Min nTPM: 20.3
Sample A Female 23.0
Sample B Female 25.6
Sample C Male 22.2
Sample D Male 20.3
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 23.1
Min nTPM: 16.3
Sample A Female 23.1
Sample B Female 17.7
Sample C Male 16.3
Sample D Male 18.2
Ventral hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 23.7
Min nTPM: 14.6
Sample A Female 17.8
Sample B Female 14.6
Sample C Male 23.7
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.3
Samples: 4

Max nTPM: 58.6
Min nTPM: 48.1
Sample A Male 52.2
Sample B Male 48.1
Sample C Female 58.6
Sample D Female 58.4
Hippocampal formation
nTPM: 58.7
Samples: 4

Max nTPM: 61.1
Min nTPM: 57.6
Sample A Male 58.5
Sample B Male 57.6
Sample C Female 61.1
Sample D Female 57.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
79536616 Antisense, RP_071018_01_A12, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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