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APLP2
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:137.5 nTPM
HPA:137.5 nTPM
GTEx:145.9 nTPM
FANTOM5:253.8 Scaled Tags Per Million
Pig:184.4 nTPM
Mouse:385.4 nTPM
Allen mouse:18.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 137.5
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 122.1
2666 Male, age 74, left hemisphere 146.5
2019 Male, age 18, unknown 133.7
1827 Male, age 72, unknown 132.0
2828 Female, age 72, unknown 124.0
2586 Male, age 75, left hemisphere 119.8
2219 Male, age 76, both hemispheres 119.5
1870 Female, age 42, unknown 118.6
2411 Female, age 72, unknown 111.9
1833 Male, age 53, unknown 109.3
1830 Male, age 51, unknown 106.0
Dorsal raphe nucleus
nTPM: 117.5
1828 Male, age 53, unknown 128.2
2298 Female, age 72, unknown 126.0
2047 Male, age 72, unknown 115.6
2016 Female, age 72, unknown 110.4
2750 Male, age 76, both hemispheres 107.5
Inferior colliculus
nTPM: 130.2
1848 Female, age 42, unknown 137.4
2097 Female, age 72, unknown 134.0
1890 Male, age 53, unknown 129.4
2849 Male, age 72, unknown 120.0
Median raphe nucleus
nTPM: 117.7
2220 Male, age 76, midline 117.7
Pedunculopontine tegmental nucleus
nTPM: 121.9
1921 Female, age 85, both hemispheres 130.9
2334 Male, age 80, both hemispheres 119.3
2338 Male, age 61, both hemispheres 115.4
Periaquaductal grey, anterior
nTPM: 132.5
2502 Female, age 75, unknown 139.5
1947 Male, age 18, unknown 136.2
1795 Male, age 51, unknown 121.9
Periaquaductal grey, dorsal
nTPM: 121.7
1840 Male, age 53, unknown 128.7
1831 Male, age 72, unknown 120.6
2464 Female, age 72, unknown 120.0
2850 Male, age 76, both hemispheres 117.6
Periaquaductal grey, lateral
nTPM: 114.6
2140 Male, age 76, both hemispheres 118.2
2272 Male, age 74, both hemispheres 113.8
2053 Male, age 18, unknown 111.7
Pretectal area
nTPM: 137.5
1816 Male, age 51, unknown 175.0
1944 Female, age 72, unknown 167.8
1817 Female, age 42, unknown 157.8
2007 Male, age 72, unknown 155.3
2667 Female, age 75, unknown 137.3
1815 Male, age 53, unknown 133.3
2224 Female, age 72, unknown 123.6
2825 Male, age 18, unknown 121.4
2273 Male, age 74, both hemispheres 120.3
2316 Male, age 76, right hemisphere 111.7
2407 Male, age 75, both hemispheres 109.6
Red nucleus
nTPM: 115.5
1821 Female, age 72, unknown 127.5
2725 Female, age 75, unknown 124.2
2785 Male, age 18, unknown 122.8
2503 Female, age 72, unknown 122.4
1954 Female, age 42, unknown 118.8
2584 Male, age 75, left hemisphere 112.6
2227 Male, age 72, unknown 112.3
2769 Male, age 72, unknown 111.4
2588 Male, age 74, left hemisphere 110.9
1904 Male, age 53, unknown 109.1
2823 Male, age 76, right hemisphere 107.6
1865 Male, age 51, unknown 106.3
Substantia nigra
nTPM: 130.5
1916 Female, age 42, unknown 152.5
1889 Female, age 72, unknown 144.2
1851 Male, age 51, unknown 138.2
2241 Male, age 72, unknown 137.8
2665 Male, age 74, both hemispheres 136.0
1941 Male, age 53, unknown 133.9
2590 Female, age 75, unknown 122.0
2409 Female, age 72, unknown 116.0
2583 Male, age 75, right hemisphere 114.9
2699 Male, age 18, unknown 109.5
Superior colliculus
nTPM: 123.2
2087 Female, age 72, unknown 154.7
2261 Male, age 18, unknown 137.5
1796 Male, age 53, unknown 132.1
1839 Male, age 51, unknown 119.6
2587 Male, age 74, left hemisphere 119.1
1895 Male, age 76, right hemisphere 117.6
2664 Male, age 75, both hemispheres 116.4
1913 Female, age 42, unknown 112.9
2668 Female, age 75, unknown 112.9
1995 Male, age 72, unknown 109.8
Ventral tegmental area
nTPM: 128.1
1915 Female, age 42, unknown 141.5
2218 Male, age 76, both hemispheres 132.8
1942 Male, age 51, unknown 131.2
2410 Female, age 72, unknown 122.7
2223 Female, age 72, unknown 121.5
2021 Male, age 53, unknown 118.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 145.9
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 145.9
Samples: 139

Max nTPM: 296.2
Min nTPM: 71.0
Std nTPM: 38.3
Median nTPM: 138.7
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 296.2
GTEX-15EO6-0011-R2a-SM-6M46R 50-59 years, male 278.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 247.5
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 245.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 243.5
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 230.5
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 213.2
GTEX-13X6K-0011-R2b-SM-5P9K3 60-69 years, female 207.4
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 205.9
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 204.2
GTEX-11GSP-0011-R2b-SM-9QEGE 60-69 years, female 195.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 253.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 253.8
FF:10158-103A5 76 years, female 253.8

MIDBRAIN - Pig RNA-seqi
Average nTPM 184.4
Pig sample Sample description nTPM
Midbrain
nTPM: 147.4
Samples: 4

Max nTPM: 187.5
Min nTPM: 117.1
Sample A Female 117.6
Sample B Female 117.1
Sample C Male 187.5
Sample D Male 167.5
Periaqueductal gray
nTPM: 117.9
Samples: 3

Max nTPM: 137.5
Min nTPM: 102.0
Sample B Female 114.3
Sample C Male 137.5
Sample D Male 102.0
Substantia nigra
nTPM: 150.5
Samples: 4

Max nTPM: 183.2
Min nTPM: 101.2
Sample A Female 175.9
Sample B Female 141.6
Sample C Male 183.2
Sample D Male 101.2
Superior colliculi
nTPM: 184.4
Samples: 4

Max nTPM: 202.1
Min nTPM: 172.2
Sample A Female 179.3
Sample B Female 202.1
Sample C Male 183.9
Sample D Male 172.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 385.4
Mouse sample Sample description nTPM
Midbrain
nTPM: 385.4
Samples: 4

Max nTPM: 423.9
Min nTPM: 347.8
Sample A Male 347.8
Sample B Male 384.7
Sample C Female 423.9
Sample D Female 385.1

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 18.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 18.0
68799083 Antisense, RP_050217_02_A05, Mouse strain C57BL/6J (56 days, male) 18.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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