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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:62.6 nTPM
HPA:62.6 nTPM
GTEx:42.1 nTPM
FANTOM5:159.2 Scaled Tags Per Million
Pig:57.3 nTPM
Mouse:49.5 nTPM
Allen mouse:15.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002548Antibody CAB022718
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.6
Sample id Sample description nTPM
Hippocampus
nTPM: 62.6
2621 Female, age 67, right hemisphere 72.8
1898 Male, age 80, left hemisphere 70.1
1855 Male, age 76, left hemisphere 67.6
2148 Female, age 91, left hemisphere 65.8
2529 Female, age 94, left hemisphere 52.9
1911 Female, age 85, right hemisphere 46.3
Dentate gyrus
nTPM: 58.6
1927 Female, age 91, both hemispheres 68.7
2010 Male, age 76, both hemispheres 58.5
2530 Female, age 94, left hemisphere 58.4
2531 Female, age 67, both hemispheres 56.7
2246 Female, age 85, both hemispheres 55.0
2528 Male, age 74, both hemispheres 54.5
Entorhinal gyrus
nTPM: 50.5
2613 Female, age 94, left hemisphere 59.3
2764 Male, age 80, right hemisphere 55.3
2686 Male, age 75, right hemisphere 54.5
1938 Female, age 85, left hemisphere 48.3
2117 Female, age 91, right hemisphere 44.0
1787 Male, age 76, left hemisphere 41.6
Hippocampus, CA1
nTPM: 59.2
1873 Female, age 85, both hemispheres 71.3
2749 Male, age 80, left hemisphere 67.3
2045 Male, age 76, both hemispheres 58.3
2527 Male, age 74, both hemispheres 52.1
2082 Female, age 91, right hemisphere 47.1
Hippocampus, CA2
nTPM: 54.8
1963 Male, age 80, left hemisphere 85.7
1892 Male, age 76, both hemispheres 64.0
2249 Male, age 74, both hemispheres 46.9
2437 Female, age 94, left hemisphere 46.2
2113 Female, age 91, right hemisphere 45.6
1940 Female, age 85, left hemisphere 40.7
Hippocampus, CA3
nTPM: 55.6
2620 Female, age 94, left hemisphere 73.3
2861 Female, age 67, both hemispheres 64.8
2137 Male, age 80, left hemisphere 55.3
1891 Female, age 85, both hemispheres 49.1
1867 Male, age 76, both hemispheres 47.7
2436 Male, age 74, both hemispheres 43.2
Parahippocampal cortex
nTPM: 48.1
2622 Female, age 67, right hemisphere 61.0
2532 Female, age 72, left hemisphere 53.9
1850 Male, age 80, both hemispheres 53.0
2245 Female, age 91, both hemispheres 52.1
2018 Male, age 76, both hemispheres 47.0
1933 Female, age 85, both hemispheres 46.5
1990 Female, age 91, right hemisphere 46.5
2692 Male, age 74, both hemispheres 46.5
2250 Female, age 67, right hemisphere 38.5
2693 Female, age 94, both hemispheres 36.1
Perirhinal gyrus
nTPM: 53.1
1794 Male, age 80, right hemisphere 57.6
2521 Female, age 94, right hemisphere 56.4
1847 Female, age 91, left hemisphere 51.6
2848 Male, age 76, right hemisphere 50.0
1841 Female, age 85, right hemisphere 49.9
Subiculum
nTPM: 47.8
2729 Female, age 91, right hemisphere 55.4
2619 Male, age 74, both hemispheres 52.0
1977 Female, age 85, both hemispheres 48.4
1901 Male, age 80, both hemispheres 46.9
2438 Female, age 94, left hemisphere 44.1
2042 Male, age 76, both hemispheres 40.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.1
Samples: 197

Max nTPM: 71.9
Min nTPM: 22.0
Std nTPM: 6.6
Median nTPM: 42.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 71.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 66.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 64.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 57.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 57.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 56.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 54.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 54.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 52.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 52.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 51.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 159.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 159.2
FF:10169-103B7 60 years, female 172.6
FF:10153-102I9 76 years, female 145.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.0
Samples: 4

Max nTPM: 62.5
Min nTPM: 41.3
Sample A Female 62.5
Sample B Female 58.9
Sample C Male 57.1
Sample D Male 41.3
Entorhinal cortex
nTPM: 48.3
Samples: 4

Max nTPM: 52.5
Min nTPM: 43.1
Sample A Female 52.5
Sample B Female 46.3
Sample C Male 51.2
Sample D Male 43.1
Subiculum
nTPM: 49.8
Samples: 4

Max nTPM: 58.6
Min nTPM: 44.5
Sample A Female 58.6
Sample B Female 44.6
Sample C Male 51.3
Sample D Male 44.5
Ventral hippocampus
nTPM: 57.3
Samples: 4

Max nTPM: 72.9
Min nTPM: 42.0
Sample A Female 54.7
Sample B Female 42.0
Sample C Male 72.9
Sample D Male 59.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.5
Samples: 4

Max nTPM: 57.6
Min nTPM: 46.1
Sample A Male 46.3
Sample B Male 46.1
Sample C Female 47.9
Sample D Female 57.6
Hippocampal formation
nTPM: 37.0
Samples: 4

Max nTPM: 43.5
Min nTPM: 29.9
Sample A Male 29.9
Sample B Male 41.6
Sample C Female 43.5
Sample D Female 32.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.0
70445293 Antisense, RP_050614_03_D12, Mouse strain C57BL/6J (56 days, male) 15.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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