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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:23.1 nTPM
HPA:23.1 nTPM
GTEx:24.8 nTPM
FANTOM5:52.9 Scaled Tags Per Million
Pig:48.6 nTPM
Mouse:111.8 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044849
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.1
Sample id Sample description nTPM
Hippocampus
nTPM: 22.1
1898 Male, age 80, left hemisphere 28.5
1855 Male, age 76, left hemisphere 21.9
1911 Female, age 85, right hemisphere 21.9
2621 Female, age 67, right hemisphere 20.7
2148 Female, age 91, left hemisphere 20.5
2529 Female, age 94, left hemisphere 19.3
Dentate gyrus
nTPM: 21.0
2528 Male, age 74, both hemispheres 23.3
1927 Female, age 91, both hemispheres 22.3
2010 Male, age 76, both hemispheres 22.1
2531 Female, age 67, both hemispheres 19.8
2530 Female, age 94, left hemisphere 19.5
2246 Female, age 85, both hemispheres 19.1
Entorhinal gyrus
nTPM: 19.7
1938 Female, age 85, left hemisphere 22.5
2117 Female, age 91, right hemisphere 21.5
1787 Male, age 76, left hemisphere 19.7
2764 Male, age 80, right hemisphere 19.0
2686 Male, age 75, right hemisphere 17.9
2613 Female, age 94, left hemisphere 17.5
Hippocampus, CA1
nTPM: 22.1
1873 Female, age 85, both hemispheres 25.0
2749 Male, age 80, left hemisphere 24.7
2527 Male, age 74, both hemispheres 22.7
2082 Female, age 91, right hemisphere 19.8
2045 Male, age 76, both hemispheres 18.5
Hippocampus, CA2
nTPM: 23.0
1892 Male, age 76, both hemispheres 29.9
1963 Male, age 80, left hemisphere 24.1
1940 Female, age 85, left hemisphere 22.6
2249 Male, age 74, both hemispheres 21.0
2437 Female, age 94, left hemisphere 20.7
2113 Female, age 91, right hemisphere 19.5
Hippocampus, CA3
nTPM: 22.0
1867 Male, age 76, both hemispheres 26.8
2137 Male, age 80, left hemisphere 24.4
2436 Male, age 74, both hemispheres 23.5
1891 Female, age 85, both hemispheres 20.6
2861 Female, age 67, both hemispheres 18.4
2620 Female, age 94, left hemisphere 18.2
Parahippocampal cortex
nTPM: 20.8
1850 Male, age 80, both hemispheres 24.2
2250 Female, age 67, right hemisphere 23.5
1933 Female, age 85, both hemispheres 22.3
2693 Female, age 94, both hemispheres 21.1
2245 Female, age 91, both hemispheres 21.0
1990 Female, age 91, right hemisphere 20.9
2532 Female, age 72, left hemisphere 19.7
2018 Male, age 76, both hemispheres 19.4
2692 Male, age 74, both hemispheres 19.1
2622 Female, age 67, right hemisphere 17.0
Perirhinal gyrus
nTPM: 23.1
1847 Female, age 91, left hemisphere 26.4
1841 Female, age 85, right hemisphere 24.2
1794 Male, age 80, right hemisphere 23.2
2521 Female, age 94, right hemisphere 21.6
2848 Male, age 76, right hemisphere 20.0
Subiculum
nTPM: 21.1
1901 Male, age 80, both hemispheres 22.7
2438 Female, age 94, left hemisphere 22.6
1977 Female, age 85, both hemispheres 21.3
2729 Female, age 91, right hemisphere 21.2
2619 Male, age 74, both hemispheres 19.6
2042 Male, age 76, both hemispheres 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.8
Samples: 197

Max nTPM: 52.5
Min nTPM: 10.9
Std nTPM: 7.7
Median nTPM: 24.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 52.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 47.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 45.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 45.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 43.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 41.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 41.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 39.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 39.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 39.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.9
FF:10169-103B7 60 years, female 68.0
FF:10153-102I9 76 years, female 37.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.6
Samples: 4

Max nTPM: 56.6
Min nTPM: 39.3
Sample A Female 56.6
Sample B Female 46.7
Sample C Male 51.9
Sample D Male 39.3
Entorhinal cortex
nTPM: 48.5
Samples: 4

Max nTPM: 56.9
Min nTPM: 39.4
Sample A Female 48.7
Sample B Female 56.9
Sample C Male 49.0
Sample D Male 39.4
Subiculum
nTPM: 46.6
Samples: 4

Max nTPM: 60.1
Min nTPM: 41.2
Sample A Female 60.1
Sample B Female 42.1
Sample C Male 41.2
Sample D Male 43.1
Ventral hippocampus
nTPM: 42.8
Samples: 4

Max nTPM: 52.1
Min nTPM: 37.9
Sample A Female 52.1
Sample B Female 38.4
Sample C Male 37.9
Sample D Male 42.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 111.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.7
Samples: 4

Max nTPM: 115.8
Min nTPM: 105.6
Sample A Male 106.2
Sample B Male 111.3
Sample C Female 115.8
Sample D Female 105.6
Hippocampal formation
nTPM: 111.8
Samples: 4

Max nTPM: 124.7
Min nTPM: 104.4
Sample A Male 124.7
Sample B Male 110.2
Sample C Female 108.0
Sample D Female 104.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
70445700 Antisense, RP_050614_04_D06, Mouse strain C57BL/6J (56 days, male) 8.7
71991726 Antisense, RP_051012_03_D02, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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