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IKZF5
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.5 nTPM
HPA:11.5 nTPM
GTEx:7.8 nTPM
FANTOM5:49.6 Scaled Tags Per Million
Pig:10.8 nTPM
Mouse:15.1 nTPM
Allen mouse:0.8 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 11.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 8.3
2288 Male, age 75, left hemisphere 10.1
2481 Female, age 94, left hemisphere 9.2
2846 Female, age 79, unknown 8.2
2290 Female, age 72, unknown 8.1
1854 Male, age 80, left hemisphere 7.9
1857 Female, age 85, left hemisphere 7.8
1781 Male, age 74, unknown 7.7
2289 Male, age 61, right hemisphere 7.1
Claustrum
nTPM: 8.7
2392 Female, age 94, both hemispheres 10.6
1956 Male, age 74, unknown 10.1
2292 Female, age 85, both hemispheres 9.5
2196 Female, age 79, unknown 9.1
2198 Male, age 80, both hemispheres 8.3
2491 Male, age 75, both hemispheres 8.3
2284 Female, age 91, both hemispheres 7.9
2568 Male, age 61, both hemispheres 7.7
2645 Female, age 72, unknown 6.9
Globus pallidus, externus
nTPM: 9.9
1996 Male, age 80, right hemisphere 11.3
2772 Female, age 79, unknown 10.2
2395 Male, age 75, both hemispheres 9.7
2646 Male, age 61, right hemisphere 9.4
2567 Female, age 72, unknown 8.9
Globus pallidus, internus
nTPM: 11.5
2287 Male, age 75, right hemisphere 13.8
2778 Female, age 91, both hemispheres 13.8
2111 Female, age 85, right hemisphere 12.7
1818 Male, age 74, unknown 10.7
2037 Male, age 80, right hemisphere 10.1
2566 Female, age 72, unknown 9.8
2483 Female, age 94, right hemisphere 9.4
Nucleus accumbens
nTPM: 9.2
2391 Female, age 94, left hemisphere 12.8
2286 Male, age 75, left hemisphere 10.1
2698 Female, age 72, unknown 9.8
1806 Female, age 85, left hemisphere 8.7
2732 Male, age 80, right hemisphere 8.3
2824 Male, age 61, right hemisphere 8.1
1783 Male, age 74, unknown 8.0
1856 Female, age 91, right hemisphere 7.7
Nucleus basalis of Meynert
nTPM: 8.1
2821 Male, age 75, both hemispheres 9.0
2569 Male, age 61, both hemispheres 8.1
2393 Male, age 80, right hemisphere 7.8
2484 Female, age 94, left hemisphere 7.5
Nucleus of the diagonal band
nTPM: 8.5
2195 Female, age 85, both hemispheres 9.0
1812 Female, age 91, both hemispheres 8.9
2775 Male, age 80, right hemisphere 8.4
1979 Male, age 74, unknown 8.2
2029 Male, age 61, right hemisphere 8.1
Olfactory tubercle
nTPM: 7.9
1846 Male, age 80, right hemisphere 8.1
2856 Male, age 75, right hemisphere 8.1
2487 Female, age 94, left hemisphere 8.0
1998 Female, age 91, both hemispheres 7.5
Putamen
nTPM: 8.0
1937 Female, age 91, right hemisphere 9.0
2482 Female, age 94, left hemisphere 9.0
1829 Male, age 74, unknown 8.4
2647 Male, age 75, left hemisphere 8.0
2466 Female, age 79, unknown 7.6
2489 Female, age 72, unknown 7.1
1838 Male, age 80, right hemisphere 7.0
Septal nuclei
nTPM: 8.1
2629 Female, age 94, right hemisphere 9.3
2394 Male, age 61, left hemisphere 9.2
2031 Female, age 72, unknown 8.3
2199 Male, age 80, right hemisphere 8.1
2009 Female, age 91, both hemispheres 7.8
1960 Male, age 74, unknown 7.6
2059 Female, age 85, both hemispheres 6.7

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 7.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 7.8
Samples: 246

Max nTPM: 14.5
Min nTPM: 4.4
Std nTPM: 1.6
Median nTPM: 7.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 14.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 14.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 13.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 13.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 12.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 12.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 12.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 11.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 10.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 10.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 7.8
Samples: 246

Max nTPM: 18.8
Min nTPM: 4.4
Std nTPM: 1.8
Median nTPM: 7.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 18.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 15.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 14.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 14.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 13.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 13.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 13.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 13.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 12.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 11.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 11.3
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Brain - Putamen (basal ganglia)
Average nTPM: 7.8
Samples: 205

Max nTPM: 14.5
Min nTPM: 4.7
Std nTPM: 1.6
Median nTPM: 7.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 14.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 13.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 13.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 12.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 12.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 12.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 11.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 11.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 10.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 10.7
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 38.7
FF:10164-103B2 76 years, female 38.7
Globus pallidus
Scaled Tags Per Million: 49.6
FF:10161-103A8 76 years, female 60.7
FF:10175-103C4 60 years, female 38.6
Nucleus accumbens
Scaled Tags Per Million: 37.2
FF:10037-101F1 23-56 years, mixed 37.2
Putamen
Scaled Tags Per Million: 39.6
FF:10176-103C5 60 years, female 39.6

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 10.8
Pig sample Sample description nTPM
Caudate
nTPM: 8.2
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.5
Sample A Female 9.3
Sample B Female 8.0
Sample C Male 8.1
Sample D Male 7.5
Putamen
nTPM: 10.7
Samples: 4

Max nTPM: 13.9
Min nTPM: 8.0
Sample A Female 13.9
Sample B Female 8.0
Sample C Male 10.3
Sample D Male 10.5
Septum
nTPM: 10.8
Samples: 4

Max nTPM: 11.7
Min nTPM: 9.7
Sample A Female 10.8
Sample B Female 9.7
Sample C Male 11.7
Sample D Male 10.9
Ventral pallidum
nTPM: 10.4
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.0
Sample A Female 9.0
Sample B Female 10.1
Sample C Male 11.1
Sample D Male 11.5

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 15.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 15.0
Samples: 4

Max nTPM: 16.9
Min nTPM: 12.4
Sample A Male 12.4
Sample B Male 15.7
Sample C Female 14.8
Sample D Female 16.9
Septum
nTPM: 15.2
Samples: 4

Max nTPM: 17.0
Min nTPM: 13.7
Sample A Male 14.3
Sample B Male 15.6
Sample C Female 13.7
Sample D Female 17.0
Ventral forebrain
nTPM: 14.7
Samples: 4

Max nTPM: 16.2
Min nTPM: 12.5
Sample A Male 16.2
Sample B Male 16.1
Sample C Female 12.5
Sample D Female 14.0

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.8
70609205 Antisense, RP_050414_01_B04, Mouse strain C57BL/6J (56 days, male) 0.8
Pallidum
Expression energy: 0.5
70609205 Antisense, RP_050414_01_B04, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.