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ATP5F1D
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:75.3 nTPM
HPA:75.3 nTPM
GTEx:206.5 nTPM
FANTOM5:262.2 Scaled Tags Per Million
Pig:234.7 nTPM
Mouse:292.9 nTPM
Allen mouse:20.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002865
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.3
Sample id Sample description nTPM
Hippocampus
nTPM: 75.3
1898 Male, age 80, left hemisphere 96.8
2621 Female, age 67, right hemisphere 77.2
2148 Female, age 91, left hemisphere 76.1
2529 Female, age 94, left hemisphere 72.9
1911 Female, age 85, right hemisphere 65.2
1855 Male, age 76, left hemisphere 63.7
Dentate gyrus
nTPM: 75.1
2530 Female, age 94, left hemisphere 101.1
2528 Male, age 74, both hemispheres 77.1
1927 Female, age 91, both hemispheres 73.1
2010 Male, age 76, both hemispheres 69.5
2246 Female, age 85, both hemispheres 64.9
2531 Female, age 67, both hemispheres 64.8
Entorhinal gyrus
nTPM: 67.9
2764 Male, age 80, right hemisphere 86.4
2117 Female, age 91, right hemisphere 75.2
2613 Female, age 94, left hemisphere 67.2
1787 Male, age 76, left hemisphere 67.1
1938 Female, age 85, left hemisphere 64.8
2686 Male, age 75, right hemisphere 46.8
Hippocampus, CA1
nTPM: 70.1
2749 Male, age 80, left hemisphere 119.2
2527 Male, age 74, both hemispheres 78.1
1873 Female, age 85, both hemispheres 65.8
2045 Male, age 76, both hemispheres 44.3
2082 Female, age 91, right hemisphere 43.2
Hippocampus, CA2
nTPM: 71.1
1963 Male, age 80, left hemisphere 92.4
2249 Male, age 74, both hemispheres 81.7
2437 Female, age 94, left hemisphere 78.1
1892 Male, age 76, both hemispheres 68.7
1940 Female, age 85, left hemisphere 55.4
2113 Female, age 91, right hemisphere 50.6
Hippocampus, CA3
nTPM: 67.3
2436 Male, age 74, both hemispheres 80.3
2861 Female, age 67, both hemispheres 75.8
2137 Male, age 80, left hemisphere 69.4
2620 Female, age 94, left hemisphere 63.9
1867 Male, age 76, both hemispheres 61.8
1891 Female, age 85, both hemispheres 52.7
Parahippocampal cortex
nTPM: 65.0
2245 Female, age 91, both hemispheres 82.6
1990 Female, age 91, right hemisphere 74.4
2622 Female, age 67, right hemisphere 73.3
2250 Female, age 67, right hemisphere 72.3
2532 Female, age 72, left hemisphere 71.0
1933 Female, age 85, both hemispheres 65.4
1850 Male, age 80, both hemispheres 56.7
2018 Male, age 76, both hemispheres 54.6
2692 Male, age 74, both hemispheres 53.4
2693 Female, age 94, both hemispheres 46.6
Perirhinal gyrus
nTPM: 63.4
1794 Male, age 80, right hemisphere 77.8
1847 Female, age 91, left hemisphere 73.2
2521 Female, age 94, right hemisphere 64.0
1841 Female, age 85, right hemisphere 55.8
2848 Male, age 76, right hemisphere 46.1
Subiculum
nTPM: 65.4
2619 Male, age 74, both hemispheres 78.6
1977 Female, age 85, both hemispheres 75.6
1901 Male, age 80, both hemispheres 73.1
2729 Female, age 91, right hemisphere 61.8
2438 Female, age 94, left hemisphere 55.6
2042 Male, age 76, both hemispheres 48.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 206.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 206.5
Samples: 197

Max nTPM: 453.0
Min nTPM: 42.7
Std nTPM: 74.7
Median nTPM: 199.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 453.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 436.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 411.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 401.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 395.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 371.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 370.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 365.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 358.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 344.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 340.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 262.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 262.2
FF:10169-103B7 60 years, female 300.3
FF:10153-102I9 76 years, female 224.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 234.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 234.7
Samples: 4

Max nTPM: 318.5
Min nTPM: 181.3
Sample A Female 318.5
Sample B Female 229.3
Sample C Male 209.7
Sample D Male 181.3
Entorhinal cortex
nTPM: 209.6
Samples: 4

Max nTPM: 234.8
Min nTPM: 174.0
Sample A Female 215.5
Sample B Female 234.8
Sample C Male 214.1
Sample D Male 174.0
Subiculum
nTPM: 197.1
Samples: 4

Max nTPM: 256.8
Min nTPM: 167.1
Sample A Female 256.8
Sample B Female 183.1
Sample C Male 181.3
Sample D Male 167.1
Ventral hippocampus
nTPM: 226.3
Samples: 4

Max nTPM: 269.6
Min nTPM: 155.8
Sample A Female 248.9
Sample B Female 155.8
Sample C Male 269.6
Sample D Male 230.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 292.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 277.3
Samples: 4

Max nTPM: 295.7
Min nTPM: 256.0
Sample A Male 256.0
Sample B Male 277.3
Sample C Female 280.1
Sample D Female 295.7
Hippocampal formation
nTPM: 293.0
Samples: 4

Max nTPM: 316.7
Min nTPM: 268.0
Sample A Male 292.3
Sample B Male 268.0
Sample C Female 294.8
Sample D Female 316.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.7
81600110 Antisense, RP_080205_02_D02, Mouse strain C57BL/6J (56 days, male) 21.3
413792 Antisense, RP_040809_01_E02, Mouse strain C57BL/6J (56 days, male) 20.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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